| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2764 |
|---|
| Symbol | |
|---|
| ID | 5734645 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3519540 |
|---|
| End bp | 3520661 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641279907 |
|---|
| Product | 4-hydroxyphenylpyruvate dioxygenase |
|---|
| Protein accession | YP_001545530 |
|---|
| Protein GI | 159899283 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
|---|
| TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGATGG CAGAACAAGA AACCACGAAT GCCCATGATC CTTTAGCATT ACGTGGCATC
GATTATGTCG AAATGTATGT TGGTAATGCC CGCCAAGCAG CTCATTACTA TCGGACGGCC
TTTGGTTTTA CGCCAGTCGC TTATGCTGGC TTGGAAACAG GCACGCGCGA CCGCGTTTCG
TTTGTGATGC AACAGCGCAA CATCCGCTTG GTTCTGACTG GGGCACTCAA TCCTGATTCG
CCAATTGCTG AGCATGTTAA ATTGCATGGT GATGGGGTTA AGGATATTGC GCTCGAAGTT
GAAAACGCCA CTGCTGCGTT CGAAGCAGCA CTTGCCCGCG GCGCAACCGC AGTGCTTGAG
CCAACCGTGC TGGAAAGCAA ATGGGGCAAA GTGGTTAAAG CGACCATTCG TACCTATGGT
CATACGGTGC ATACGTTTGT TGAGCGCGAT GGCTATACTG GTACGTTTAT GCCAGGCTAC
AACAAGGTTA AAAATCCGGC CAAAGCTGAG CCAACTGGTT TAGCCGCGGT TGATCATATT
GTGGGTAACG TTGAGCTAGG CAAAATGGAT GAATGGGTCA ATTTCTATGC CCGCATCCTT
GGGTTTAGCC AACTCCAACA ATTTACCGAC GACGATATTT CAACCGAATA TAGCGCCTTG
ATGTCGAAAG TCGTGCAAAA TGGCACAGGC CGGATCAAAT TCCCAATTAA TGAGCCAGCC
GAAGGTCGCA AAAAATCACA AATCGATGAA TATCTCGATT ATTACCGTGG CCCCGGTGCT
CAACACATCG CCTTGATCAC GCCTGACATT ATCAAAACTG TGCAGCAGCT GCGTGATAAT
GGCGTGGAAT TTTTGCGCAC GCCGGATACA TATTACTCGG CCTTGGCCGG TCGGGTTGGC
CATATCGACG AGGACTACAA TACCCTGCAA CAATTGGGTA TTTTAGTCGA TCGTGACGAT
GAAGGCTATC TCTTGCAAAT CTTCACCAAA CCAGTTGGCG ATCGACCAAC CGTGTTCTAC
GAGATTATTC AACGCAAGGG CAGCCGTGGC TTTGGTGCTG GAAATTTCAA AGCCCTATTT
GAAGCGATTG AGCGCGAACA AGCCAAACGT GGCAATTTGT AA
|
|---|
| Protein sequence | MTMAEQETTN AHDPLALRGI DYVEMYVGNA RQAAHYYRTA FGFTPVAYAG LETGTRDRVS
FVMQQRNIRL VLTGALNPDS PIAEHVKLHG DGVKDIALEV ENATAAFEAA LARGATAVLE
PTVLESKWGK VVKATIRTYG HTVHTFVERD GYTGTFMPGY NKVKNPAKAE PTGLAAVDHI
VGNVELGKMD EWVNFYARIL GFSQLQQFTD DDISTEYSAL MSKVVQNGTG RIKFPINEPA
EGRKKSQIDE YLDYYRGPGA QHIALITPDI IKTVQQLRDN GVEFLRTPDT YYSALAGRVG
HIDEDYNTLQ QLGILVDRDD EGYLLQIFTK PVGDRPTVFY EIIQRKGSRG FGAGNFKALF
EAIEREQAKR GNL
|
|---|
| |