Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2750 |
Symbol | |
ID | 5734631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3506594 |
End bp | 3508159 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641279893 |
Product | chitinase |
Protein accession | YP_001545516 |
Protein GI | 159899269 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3325] Chitinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTGA TCCATCGTCG GTTTCGGTTT CTAGCCTTTA TCTTAATTCC CGTTCTTGTT ATGTTGATGG CATTGAGCCA ACAAAAGGTT CAGGCAGCCG CACCTGCATG GGATGGTAAC TATCATGCCT ATGCGATTGG GGCACGAGTA AGCTATGCTG GTGGCGAATA TGAATGTATT CAACCGCATA CTTCATTGCC AAATTGGAAT CCAGTTGATG TTCCAGCCTT GTGGCGAGCG GTTTCACCAA GCAATCCAAC CGCGACTTCA ATTCCAGCCA CCGCAACTCC ACGCCCTGCA ACATCAACGC CTCTGCCACC AACGGCAACG CCACGACCTG GCACGGCCAC GCCAACGCCA AATAATCCAA CCGCAACCCC ACGCCCAGCA ACTGCAACCC CAGTCTTGCC AACTGCAACC ACCACACCTG GCGGTGGCAA ACGCATCATC GGCTACTTCG CTGAATGGGG CGTCTACGGT CGCAACTATC ACGTTCGCAA TATCAAAACC AGTGGCTCAG CTGCTAAGTT GACCCACATC AACTATGCCT TTGGCAATGT TGTCAATAGC CGCTGCCAAT TGGGCGACAC CTACGCCGAT TATGATCGGG CTTATAGCGC TGCTGAAAGC GTCGATGGCG TAGCTGATAC TTGGGATACT GGCGTATTGC GCGGTAGCTT TGGCCAATTG CGCAAACTCA AAGCCGAATT CCCCCACTTG AAAGTGTTGA TTTCATTGGG TGGTTGGACG TGGTCGGCAG GTTTCTCGGA TGCTGCCTTG CCAGCTAACC GCGCAGCCTT CGTCAAATCA TGTGTTGACC TGTTCATCAA AGACCCACGC TGGGCTGGCG TATTCGATGG CATCGATATC GACTGGGAAT ACCCCGCAGC TTGTGGTAAC ACCTGTAACT ATCGCCCTGA AGATACCCAA AACTTCACCG CCTTGTTGAG CGAATTCCGC AGCCAATTGA ACGCAGTTCG CCCAGGCTTG TTGTTGACGA TTGCTGCCCC AGCCGACCCA GCCAAGATCG CCAAGATTCA GGTTGGTCAA ATTCACCAAT ATCTCGATTT CATCAACATC ATGACCTACG ACTTGCACGG CGCTTGGGAA GCTAACACCA ACTTCCAATC AAACTTATAT TCAATCGCTG GCGATCCCGG CCCAGTCTAC TCGGTTGATA TTGCTGTCAA CGCTTGGTTG AATGGTGGAA CTCCAGCCGA TAAAGTTGTG GTTGGTGTAC CATTCTATGG TCGCGGCTGG AAAGATGTAC CAAGCACCAA CAATGGCTTG TTCCAACCTG GCTCAGCTGC TCCAGCAACT TACGAAGCTG GCATCGAAGA TTACAAAGTG TTGAAAACCA AAGGCTTGAC CCGCTACTCA AATAGCGCTG CTGGCGCTGC TTGGCTCTAC GGCAACGGCC AATTCTGGAC CTATGATGAC CCAGCCATTA TGAAAGTCAA GACTGACTAT GTAAAAGCCA AAGGTCTTGG CGGCACGATG TTCTGGGAAT TGAGCGGCGA CACCACGAAT GGCGAATTGA TCAACGCCCT TTACCAAGGT CGCTAG
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Protein sequence | MNLIHRRFRF LAFILIPVLV MLMALSQQKV QAAAPAWDGN YHAYAIGARV SYAGGEYECI QPHTSLPNWN PVDVPALWRA VSPSNPTATS IPATATPRPA TSTPLPPTAT PRPGTATPTP NNPTATPRPA TATPVLPTAT TTPGGGKRII GYFAEWGVYG RNYHVRNIKT SGSAAKLTHI NYAFGNVVNS RCQLGDTYAD YDRAYSAAES VDGVADTWDT GVLRGSFGQL RKLKAEFPHL KVLISLGGWT WSAGFSDAAL PANRAAFVKS CVDLFIKDPR WAGVFDGIDI DWEYPAACGN TCNYRPEDTQ NFTALLSEFR SQLNAVRPGL LLTIAAPADP AKIAKIQVGQ IHQYLDFINI MTYDLHGAWE ANTNFQSNLY SIAGDPGPVY SVDIAVNAWL NGGTPADKVV VGVPFYGRGW KDVPSTNNGL FQPGSAAPAT YEAGIEDYKV LKTKGLTRYS NSAAGAAWLY GNGQFWTYDD PAIMKVKTDY VKAKGLGGTM FWELSGDTTN GELINALYQG R
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