Gene Haur_2717 details

Gene Information

• Locus tag: Haur_2717
• ID: 5734598
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 3472797
• End bp: 3473507
• Gene Length: 711 bp
• Protein Length: 236 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641279860
• Product: ABC transporter related
• Protein accession: YP_001545483
• Protein GI: 159899236
• COG category: [V] Defense mechanisms
• COG ID: [COG1131] ABC-type multidrug transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAAATA GCCAGTTCGC AAGCATCAAA CGGCCAAGCG CCTATGATAC AATAGACTCT 
GTGATGAATC GAACAGATGT GGCGCTACAA CTGAGCTGGC ACGAGCTTGC CAAAACCTAC 
AGCACCCGCC CGGTCTACGA CCAGTTGGCG GGCGAATTGC ATAGTGGTGA AGTTTTGGCA 
GTGCGCGGCC CAAATGGCGC TGGCAAATCG ACCTTTTTGC GCTTGCTCTG CGGACTCGAA 
CGGCCAAGCG CTGGCACAAT TCGCTATCAG TGGCAAGGCC AAACCTACAG CCCCAACACG 
ATGCGCCCCT GGATCGGCTT TGTTGGGCCA GATGTCGCTT TGTATCGTGA ATTAAGCGCG 
ATCGAACATT TGCAATTTTT GGCCAAAGCC CGTGGTTTAG CCGCCGATCA AGTTTATTGG 
CGCGAATTGT TGGCCCAGGT TGGGTTGGCT GGTCGTGAAG CAGAACGGGT CGCCCATTTT 
TCATCGGGCA TGGCCTTGCG TTTGAAATAT GCAATTGCGC TTTTAGCCAA GCCACCAGTG 
CTGCTGCTCG ATGAGCCAAC CGCCATGTTC GATGAGCCAG GTCGCCAATT TGTGGCTCAG 
CTGGTTGAAC AACAGCGCCA GCATGGTCTG ACCATCTTGG CCACCAACGA TCAGCGCGAT 
GCTGCTTGGG CAGATCTCGT TTTGACGGTA GGAGCGGCGG CGCGTGGCTA A 

 

Protein sequence

MPNSQFASIK RPSAYDTIDS VMNRTDVALQ LSWHELAKTY STRPVYDQLA GELHSGEVLA 
VRGPNGAGKS TFLRLLCGLE RPSAGTIRYQ WQGQTYSPNT MRPWIGFVGP DVALYRELSA 
IEHLQFLAKA RGLAADQVYW RELLAQVGLA GREAERVAHF SSGMALRLKY AIALLAKPPV 
LLLDEPTAMF DEPGRQFVAQ LVEQQRQHGL TILATNDQRD AAWADLVLTV GAAARG