| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2712 |
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| Symbol | |
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| ID | 5734593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3465507 |
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| End bp | 3467030 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641279855 |
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| Product | cyclic nucleotide-regulated small mechanosensitive ion channel |
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| Protein accession | YP_001545478 |
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| Protein GI | 159899231 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0470198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGCG TCATTGAGCA TATCATTCAG CCAATGCTGT GGGCAATTGG CACCTATGCA
GTGTTGCGCC TGTTAATCCG GCTTGGTCGG CGCATTGGGC TGATTAGCGG GTTAAGTATC
CTTGGCCAAT TTTTGGCGCT CAGTAGTGCT GGCTTAATTG GCCTATGGTC GGATCAACAG
CTTGAACATT GGCCGCTGCT CACTAAAATT TTGCAAACTA CCGTGACTGT TTCGATTATT
GCGGTGGTTT TGCATATTGG TGATCAACTA TTGGTGCGGC GTTTGGCTGC CGATGGTCGC
CCTAACGCCA TCCCGCGCTT GATGCGTGAT ATTGCCCGTG GTTTTGTACT GCTTATGACC
TTGCTGATTT GCATTGGCCA TTTTTTCAAA GTGCAAATTG GCACAGTGCT GCTCAGCTCG
ACCGTTTTTA CCGCTGTGGT TGGCCTTGCC TTACAAGATT TGCTCAAAAA TGTGATTGCT
GGGATTGCGC TGCAAATGGA GCGGCCTTTT ATGCCTGGCG ATTGGATTTT TATCGATGTG
CAAACTGGCT ATGGCCGCGT TTTGGAGATG AGCTGGCGGG CGATTCGGGT CAAGCCGCGT
GATGGACAGG TCGTGGTCAT TCCCAACACG ATTATTGCCC AACAACAAAT TATCAATATG
AGTGCAACTG GCTTGCCTGT AGCCATGCGG GTTGCAGTAA CCGTCGATTG TGTGCACCCG
CCAATGATGG TGCGCGAATT GTTGAAAGAA GCAGTACTTT CCAGTCGCGG GGTCGTCGCC
CAGCCGGAAC CATTTGTATT TGTGCGCAAC TATACTGCAT TTTCCACAAC CTACGAAGTT
AAATGTTGGA TCAGCAACTA CGATGATTTT CCCCAGTTGC AAGGTGATGC ACTCAGCCGA
ATTTGGTATG TGTTCCAGCG TCAAGGCATT CACTTTGCCT CAAACGAAAT GGTGCTGACC
CGTCCTGAAC AAGCGAGTCG GCAACGCCGG CTTGATTATA CCCCTGAGCA AATTTTCGAC
CGTTTGCGCC GAATCAAGCT GCTCGATGGC TTGCACGAGC AAGAATTGCG TTTTTTATCG
GAGCATGTCG AAATTCGCTT ATTTGAGCGC GGCGAAATTC TGGCCCATCA AGGCCGCCAT
GAACATATTT TGTATGCAAT TACCCGCGGC AAAGTACGGG TTGAAGTTGC GCATGACGAT
CAGCCTGCAA TTGTCGTCTC GCACTTAGGC GCTGGCGATG TGTTTGGCGA GCGTGGCATG
TTAATGGATG AGCCACGTTC GGCTAGCGTG ATTGCCGAGG AAGATACGCG TACAATTGTG
ATCGAACGCC ACGATTTGGC TCCGCTGTAT GCCAAAAATC CCTCATTGGC TGAACGTTTG
GGGGTTATGG TAGCCGAGCG CCAACAAGCT ACCCACAATT ATTTAGAGCA GCAACGCTCG
GTCAACCAAA ACCCCACGCC ATCGCCTGCT GCCCGCTCAA TCACCGAGCG CATCCGCGAT
GTGCTGCTCG ATTTGAGCAA ATAA
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| Protein sequence | MLSVIEHIIQ PMLWAIGTYA VLRLLIRLGR RIGLISGLSI LGQFLALSSA GLIGLWSDQQ
LEHWPLLTKI LQTTVTVSII AVVLHIGDQL LVRRLAADGR PNAIPRLMRD IARGFVLLMT
LLICIGHFFK VQIGTVLLSS TVFTAVVGLA LQDLLKNVIA GIALQMERPF MPGDWIFIDV
QTGYGRVLEM SWRAIRVKPR DGQVVVIPNT IIAQQQIINM SATGLPVAMR VAVTVDCVHP
PMMVRELLKE AVLSSRGVVA QPEPFVFVRN YTAFSTTYEV KCWISNYDDF PQLQGDALSR
IWYVFQRQGI HFASNEMVLT RPEQASRQRR LDYTPEQIFD RLRRIKLLDG LHEQELRFLS
EHVEIRLFER GEILAHQGRH EHILYAITRG KVRVEVAHDD QPAIVVSHLG AGDVFGERGM
LMDEPRSASV IAEEDTRTIV IERHDLAPLY AKNPSLAERL GVMVAERQQA THNYLEQQRS
VNQNPTPSPA ARSITERIRD VLLDLSK
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