Gene Haur_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2711 
Symbol 
ID5734592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3464835 
End bp3465497 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content53% 
IMG OID641279854 
ProductSCP-like extracellular 
Protein accessionYP_001545477 
Protein GI159899230 
COG category[S] Function unknown 
COG ID[COG2340] Uncharacterized protein with SCP/PR1 domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000599492 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTA GTTTGCGTGG CGTAGGCTTA TTGCTGATAG GAATTGTAAT TGGCATGATC 
ATTGGGGTGT GGTGGTTAGC GCCACGCCTC AATGGAACGA TTATTCGCTT TGAGAGCGCT 
ACCAATCCAA TTGCTAGCCC TAGCGTACCG ACGATCACGC CCAATCAAGC ACCAATGCCA 
AGCGCCACCA GCCCAGCCAG CCCAAGCAAC TCGGCTAGTC CAACTCCATC AGCGACCATC 
CAAGCAACTG CTAGTTTGAC CAGTTCCGGT GATCTTAAGC TTGATCTGTT AGCGGCGGTT 
AATCGCGAAC GCCAACAAAC CAATTGTGAA GCCTTGGTTT TCGATTCGCG GCTGCAAAGC 
ATCGCCCAAG CCCATGCCGA TGATATGGCT CAGCATGAAA AAATTGATCA CGTTGGCAGC 
GATGGTCGCA GCTACAGTCA GCGGCTTGAG GCGGTTGGCT ATCAATTTAT TCGGCGCGGC 
GAAAATATCT CAGCCTGGTT CGCCACTCCA ATCAAGGTTG TGGCTCAATG GATGGACGAG 
CCAGTTGATG GGCCACATCG CGCCAACATC ACCAATTGTG CTTATCGCCA TGTGGGCATT 
GGCCTAGCCT ACGTTGGCGA CCACCCGTAT TGGGTGCTTG ACATGGCCGA ACCAAAACCC 
TAA
 
Protein sequence
MASSLRGVGL LLIGIVIGMI IGVWWLAPRL NGTIIRFESA TNPIASPSVP TITPNQAPMP 
SATSPASPSN SASPTPSATI QATASLTSSG DLKLDLLAAV NRERQQTNCE ALVFDSRLQS 
IAQAHADDMA QHEKIDHVGS DGRSYSQRLE AVGYQFIRRG ENISAWFATP IKVVAQWMDE 
PVDGPHRANI TNCAYRHVGI GLAYVGDHPY WVLDMAEPKP