Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2708 |
Symbol | |
ID | 5734589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3462450 |
End bp | 3463211 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641279851 |
Product | DNA repair protein RecO |
Protein accession | YP_001545474 |
Protein GI | 159899227 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00607294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGACC GATTATATAC CACCGAAGCC CTGATTATTC GGCGCTCCGA TGTTGGCGAG GCTGATCGGA TTCTGACGAT CTACACGCCG CATCATGGCA AACTCAGCGT TACGGCGCGA GGTGTGCGCA AAATGACCAG CAAATTGGCT GGCCATTTGG AGCTGTTTAT CCACACCCGC TTACAACTTG CCAAAGGCCG CTCATTCGAC GTGGTGACCG AAAGTCGGGT AGTCCAGCCA TTTCGCAGCT TGCGCGAAGA TCTCTCGCGG ATCAGCCAAG GCTATTACGT GGCCGAATTG CTTGATCAAA TGACCCCCGA CGAGAGCGAT AATCCGGCGC TTTTTCGCCT AACATGCGAA ACCCTAGCAG CCTTGGATGT GCTTGATGAC GTTGTGCGGC GTGATGTCAT TTTGCGGTAT TATGAATTAC ACACGCTGAT TCTTTCAGGC TATCGGCCAC ATCTGTTTGA TTGTGCTAAC TGTGAACGCG AGCTTAGCCC AGATGCAGAT CGATACAGCC CAATCACTGG AGGTGTTTTA TGTCAACAAT GTTCAAGCAA CGAGCCACGA ACATTGCCGA TCAACCTCAA TACCTTCAAA TTGTTACGCT ATCTGGCGCG AATGCCGCTG GAGACAGTTG TCAGCCTTGT ACCGGCCCCA GCGACAGTTC AGGAAGCGCG ATTAGTCTTG AAAGCCTCGT TAAGCCAAAT TTTAGAGCGT GAGCTAAAAT CAACCCAATT TCTCAATTTA GTGCGTGGTT GA
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Protein sequence | MRDRLYTTEA LIIRRSDVGE ADRILTIYTP HHGKLSVTAR GVRKMTSKLA GHLELFIHTR LQLAKGRSFD VVTESRVVQP FRSLREDLSR ISQGYYVAEL LDQMTPDESD NPALFRLTCE TLAALDVLDD VVRRDVILRY YELHTLILSG YRPHLFDCAN CERELSPDAD RYSPITGGVL CQQCSSNEPR TLPINLNTFK LLRYLARMPL ETVVSLVPAP ATVQEARLVL KASLSQILER ELKSTQFLNL VRG
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