| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2670 |
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| Symbol | rplU |
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| ID | 5734565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3423590 |
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| End bp | 3423961 |
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| Gene Length | 372 bp |
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| Protein Length | 123 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641279812 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_001545436 |
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| Protein GI | 159899189 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000122926 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCTCT CTTTTTTATC AGCGGCGGAC CAAACCGCCA GAAGGAGCGG CATCGTGTAC
GCCATTATTC GAGACCGTGG CCAACAGTAT CGCGTTGAGC CAGGCCAAAC ATTGCAAATT
GCCTTGACCG ACGCTGAAGA TGGAAGCACT ATCGAATTTA ATGAAGTCTT GATGGTTGGT
GGCAGCGACA CCCTTGTCGG CTCCCCATTG ATCAGTGGCG CAGTTGTGAA AGCAACCGTT
GGCGAAGTTG TGAAGGGCGA AAAGATTATC GTGTTCCGCT ACAAAGCAAA GGCACGCTAT
CGCCGCCGCA CCGGCCATCG CCAAAAATAC ACTGAAATCA CCATCAACGA TATTGTAGTT
CCAAGCAAGT AA
|
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| Protein sequence | MPLSFLSAAD QTARRSGIVY AIIRDRGQQY RVEPGQTLQI ALTDAEDGST IEFNEVLMVG
GSDTLVGSPL ISGAVVKATV GEVVKGEKII VFRYKAKARY RRRTGHRQKY TEITINDIVV
PSK
|
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