Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2631 |
Symbol | |
ID | 5734509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3375828 |
End bp | 3376535 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641279771 |
Product | HAD family hydrolase |
Protein accession | YP_001545397 |
Protein GI | 159899150 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGGTC GTCCGCTAGT ATTGTTTGAT ATTTATGGCA CGCTGGTTGA TGTGCATACC GACGAACATC AGCCAGCGTT GTGGCAACAC TTGGCGCAGT GGTTGCGGTA TCGTGGTTTG GCTTGTAGTG CTGATAGTTT ACATAAGCGT TATTTTGCGG CGATGCAAGC CAATTTGCCA GCCCATGAAG CCTACCCCGA ATGGCAAACT GAGGCGGTTT GGGCTGAGTT GCTCGCTGAA TTTGGGCTTG ATCCGGCTGA GGCGGTGAGT ATCACTCAAT TATTACGAGT GTTGAGCATT AAGCATCTAC GACTTTTCCC CGATACCAAA GAGGCCTTGC GCATTCTACG CCAGCACTAT TGCTTGGGCA TTGTTTCTGA TGCGCAGCGA GTGATTGCAC TGGCTGAATT AGCTGAATTA GAAATTCTGG AATATTTCGA CCCAATCGTT ATTTCTTCGG ATTATGCCTA TCGTAAGCCC GACCCGCGTT TGTTTGCTCA TGCCTTGGCT CAAGTCGAAA CTCCGGCCAA CCATCCTTGG TATATTGGCG ATAATCTGTT TCGCGATGTG CAAGGTGCGC AGTTGGCAGG CTTACGGGCG GCCTGGGTCA AGCGACCGCA AGCCACCACC GAAGCCTCGC AGCATACCCC CGATTTGATT GTGCCTGATC TCATGACCTT TGCGCTGCAT TTGATTGCGA ACTTCTAG
|
Protein sequence | MPGRPLVLFD IYGTLVDVHT DEHQPALWQH LAQWLRYRGL ACSADSLHKR YFAAMQANLP AHEAYPEWQT EAVWAELLAE FGLDPAEAVS ITQLLRVLSI KHLRLFPDTK EALRILRQHY CLGIVSDAQR VIALAELAEL EILEYFDPIV ISSDYAYRKP DPRLFAHALA QVETPANHPW YIGDNLFRDV QGAQLAGLRA AWVKRPQATT EASQHTPDLI VPDLMTFALH LIANF
|
| |