Gene Haur_2555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2555 
Symbol 
ID5734433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3282044 
End bp3282661 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content52% 
IMG OID641279695 
ProductTetR family transcriptional regulator 
Protein accessionYP_001545321 
Protein GI159899074 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.776584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCTG AGCCATCCGA GGGATCTGAT GAGCCGAATG TGTATCAATC GTTGTTGCAT 
CGCCAACGTC CAGGCGGGCG CAGTGCTAAG GTGCATGCGG CGGTGTTGCA AGCCACTGGC 
GAATTATTGT TCGAGCAAGG CTATGCCCAG TTGCGGATTG CTGATGTAGC TCAACGCGCA 
GGGGTGCATG AAACCTCAAT TTATCGGCGC TGGAAAACTA AGGCCATGCT GGTGGCGGAT 
ACCGTGCTAG CCTTGTTTGA TCAGCATGTG CCAAACCCCG ATACTGGCTC GTTTCGCGAG 
GATGTATTGA GCTTTTTGCC CAGTTTGGTG CGCTATTTAC AATCGCCAGA GGGTGAAGCG 
CTTGGTCGGG CTTGTGTTGA TGTTTCAAAT TTGGCCGAGG CGGCTGAGGC GCGTCAAGCA 
GTCTGGGGCA TTTGGGTCGA TCAATTTGGA GTATTGGTTG AGCGAGCGAT CGCTCGCGGT 
GAGTTGCCAG CAACAATCAA TGCCCAAATT TTTCTGGAGA TGTTGATTGG GCCATTTTTT 
CTACGCTTAC TCGTGACGGG CGAGCCATTA CACGAAGCAA TGGCGGTGCA GGTAATTGAT 
CTGCTCTTAC AGCATTAA
 
Protein sequence
MKSEPSEGSD EPNVYQSLLH RQRPGGRSAK VHAAVLQATG ELLFEQGYAQ LRIADVAQRA 
GVHETSIYRR WKTKAMLVAD TVLALFDQHV PNPDTGSFRE DVLSFLPSLV RYLQSPEGEA 
LGRACVDVSN LAEAAEARQA VWGIWVDQFG VLVERAIARG ELPATINAQI FLEMLIGPFF 
LRLLVTGEPL HEAMAVQVID LLLQH