| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2543 |
|---|
| Symbol | |
|---|
| ID | 5734421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3264814 |
|---|
| End bp | 3266379 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 641279683 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001545309 |
|---|
| Protein GI | 159899062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000588775 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA ACGAAATTTG GACAACCCAA GATCAATATT ATACATATAT TAAGAAAATT
GCTGATAATA TTTTTAAGGA CTCAAATATT ATTTATGAAA TATTGATATT TGGTGTTAAG
TATCATGATA GAAATCAATG TTCAGTAATA TTATACCCAG ATAATAAAAA TAATATTATT
TTATCTGAAA TGATAAAAAA GAAATTAATG TCTAGTAACA AGGGAATTAA AAAAGGAGTA
ATCCCTGAAA AACGTAGTAC AAATCTTGAT TCAAATGATA TTTCGCATAG AGCTATGATA
AATTCATTTT TAAATGCTAA GAAGAAATTT AATTTACAAA ATAAAAATAT AAAATATAGA
AGAAAATATA ATTTAGATAC ATATAAATTA TTTAATAAAA ATAATAAATG TTTTGCATAT
TTCTCGCAAG TCAGGGATAT TTTAGGTTAC GATGTTTATA TAATATTTAA TCTAGATAAA
AAATCATCAT CAAATTATCA TAAATTTCAT GACCCTAGGG AAGTTGGGCG AGGTGAAATA
CGATCATTTA TTGATGCAGT TATCTATTCA TACCTTAATA AATGCGTTTC CGTTTTAGAA
TCATTATTTA AAGACGAAAT AGTTTATAAA AATAATGAAA TAATATCAAT TTCAAATAAG
ATACTAATCT CATCAGGGGA ATCTTTATTG AAAGGGGTTA TTGAAATATT AGATATCGAT
AAGAAGGATG ATGAAGTACA AATAGATATG TTTGATTTGA TTAATTCTAT ATCACAAATG
AGCTATGAAA ATACGTATAT TAATGGATAT TTAGTATTGA TTAATGATGA TAAATTAAAG
AATATGCAAT ATATATTTAA GTTAAAAGAT CATAAAGATT ATAGAATTAA TAAAAGTAAA
ACCACGAGAA AATTAATTCA AATGGCAAGA AATAATATTG TATTAGCTAC AGATTCAATA
TTCATCTATG GATTGTATTA TAAAAACATA ATTGAGCAAT TAAAAGATGT ATTCATTATA
AAAATTATTG GACAAAGTAA ATGGGAATTG TATTATAATA AATGGATGTT GATGTATGTT
GAATATAGTA TACCAAGGAT AATAACAGGA ATTAATCAGG ATGAAATTCG TAATCGTATT
ATCAACGCTG AATTTAGGCA AGAATACATA GATGATATAC ATAGATTTAT TTTAGATGTC
ATAGAAGTTG CACTAAAAGA ACGAAAAGGG ATTACATTAA TTTTTGGTAA CGATGTACAA
GAAGAGATCG CTAATAATAA TATTGTTTGT ATTAAAATTG AAGTTAGGTC AATTAGAGAT
ATTTTTAAAT CAATAAACTC TCTACTTACT ATCGATGGAG GAATATTAAT GGATAAAGAA
GGTCGATGTT ATGCAATTGG GGCAATTTTA CAATATGGCT CTTCTGAACA AAATGATCCG
GCTCGCGGAT CACGCTATCA TGCTGCAAAA GCTTATTCTG AGAAGGCGAA AGAGAAAAAT
TCGCGCTTTG TAGTTGTTAT CTCAGAGGAT GGATATATTG ACTTTTTTCC TGAACCTGAA
AAATAG
|
|---|
| Protein sequence | MSMNEIWTTQ DQYYTYIKKI ADNIFKDSNI IYEILIFGVK YHDRNQCSVI LYPDNKNNII
LSEMIKKKLM SSNKGIKKGV IPEKRSTNLD SNDISHRAMI NSFLNAKKKF NLQNKNIKYR
RKYNLDTYKL FNKNNKCFAY FSQVRDILGY DVYIIFNLDK KSSSNYHKFH DPREVGRGEI
RSFIDAVIYS YLNKCVSVLE SLFKDEIVYK NNEIISISNK ILISSGESLL KGVIEILDID
KKDDEVQIDM FDLINSISQM SYENTYINGY LVLINDDKLK NMQYIFKLKD HKDYRINKSK
TTRKLIQMAR NNIVLATDSI FIYGLYYKNI IEQLKDVFII KIIGQSKWEL YYNKWMLMYV
EYSIPRIITG INQDEIRNRI INAEFRQEYI DDIHRFILDV IEVALKERKG ITLIFGNDVQ
EEIANNNIVC IKIEVRSIRD IFKSINSLLT IDGGILMDKE GRCYAIGAIL QYGSSEQNDP
ARGSRYHAAK AYSEKAKEKN SRFVVVISED GYIDFFPEPE K
|
|---|
| |