| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2532 |
|---|
| Symbol | |
|---|
| ID | 5734410 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3235768 |
|---|
| End bp | 3237411 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641279672 |
|---|
| Product | PGAP1 family protein |
|---|
| Protein accession | YP_001545298 |
|---|
| Protein GI | 159899051 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1075] Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.990857 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGTC GGATTGCAGT TATTTTGGCC CTGATCGCCC TCATGTTGGC CACCGTTAGC
CTTCCACACA AGTCGGTTCA AGCCCAAGCA GCCCATTTAA CCGCTGCGCC AGCTCCGCGT
ATTATTGCTG AAGTCAATGG TGCTGGTAAA GGCCGTGTTT GGGTGGGTGC TGTGCCAGCC
AACAGCAGCA GCAAGCCAGT CTTGGTCTTT GTCCATGGGT TACACGGCAA GGCTCCCAAC
TGGTGGGGCG CAACCATGTA CCATGGCACG AACGATATGT ATGATAAAGC CTATGCGGCT
GGTTATCGTA CCGCCTTTGT GAGTATTGAC GACGAAGTTG ATGGCCCTGC CTCATCAATT
TGGGTCAATG GCGCAACCTT GAATCGCCAA TTAGATGTTA TTTTAAGTCA TTATGGAGTA
AGCTCGGTTA ACATTATCGC CCATAGCAAA GGTGGTGTCG ATACCAACAG TGCTGTGATT
CACTATGGTG CAAGTGGCAA GGTGCAAAAT ATTGTTACCC TCAGCTCGCC ACATCGTGGT
TCACAATTGG CCGACTTGGC GTATAGCTGG TGGGCTGGCT GGTTGGCTTC GTTGCTGGGC
CAACGCGATG ATGGCACCTA TTCAATGCAA ACTGCCTATA TGAGCAACTT CCGCTCGCAA
ACTGATGGCA GCGCCAACTA TAGCAATGTG CGCTTCCACA CCGCTGGTGG CACCAACCAT
GGCCCAGCTT TCTCGGCCAT GTGGTTTGGC GGAGCCTATA TCTCAGGTGA TAATGACGGG
GTGGTGCAAG TCAGTAGCTC AATTCACCCT CGCCAATATT CACGGCTCTT TACCCGCAAC
TACGACCACG ACAATATTCG TTTGGGCAGC GTGGTTTGGA GTTCAATCGA GCCAAGCGTG
CGCGGAACCT TCCGCAGCAA AGTCAGCGAA AATAGCGCTA ACAGCCCAGT TGTTGATCAA
GCAACTACGA TCAATGCCAA TAGCATTTTG CGTGGTGGGA TGCTCGAAAA CGCCAGCCGT
GGTGGCATTC GCTTCAATCT TGAAACTGGG GTAAAAACCG CCAACTTCGA TTTTGTCAGC
AATAGTGCTG ATCTCGATGT AGCTTTTGTT GATGCCCAAG GCAACCGCTA TGCTGCCAAC
AAGCCAGTGC TTGATACAGA ATTCTTCCGT GGAGCCTACC ACTACAGCGC CGAAGTTGCT
GCTCCAGCGA GCGGTGCTTG GTCGGTGGTG GTCAGCGGTG GCAAGGCCGA TACCGCCTAT
CTGTTCAACG CCACATTGGA TAGCAACTTG AACGTGCAAC TTGATGCCGC TAGCTTGTTG
GCTCAGCCAA ACCAAAGCTT GGGCTTGAAG GTCAATGCTG CCAATGCCCA AGGCTTGAGT
GTCAAGGCTC AATTGACTGG CACACCTCAA GGTACAGAAT TGCACAGCGC TTTGCCAACC
AACCGTAGCC TCTCGGCGAA AGGTGTTGAT AGCGCTAGCC TGAATTTGAC TAGCCCGCAA
GCCTTTGGTT TGTATCAAGT GGCCGTAACC GTCACTGGTA CTGCCGCCGA TGGCAGCAGC
TTCGAGCGCT CAATTCCGCT AAATATCGGG GTTGTCGATA GCGCTACCAA GAACCCAGCC
AACAGCCTGC CTGCTGGCCG CTAA
|
|---|
| Protein sequence | MKRRIAVILA LIALMLATVS LPHKSVQAQA AHLTAAPAPR IIAEVNGAGK GRVWVGAVPA
NSSSKPVLVF VHGLHGKAPN WWGATMYHGT NDMYDKAYAA GYRTAFVSID DEVDGPASSI
WVNGATLNRQ LDVILSHYGV SSVNIIAHSK GGVDTNSAVI HYGASGKVQN IVTLSSPHRG
SQLADLAYSW WAGWLASLLG QRDDGTYSMQ TAYMSNFRSQ TDGSANYSNV RFHTAGGTNH
GPAFSAMWFG GAYISGDNDG VVQVSSSIHP RQYSRLFTRN YDHDNIRLGS VVWSSIEPSV
RGTFRSKVSE NSANSPVVDQ ATTINANSIL RGGMLENASR GGIRFNLETG VKTANFDFVS
NSADLDVAFV DAQGNRYAAN KPVLDTEFFR GAYHYSAEVA APASGAWSVV VSGGKADTAY
LFNATLDSNL NVQLDAASLL AQPNQSLGLK VNAANAQGLS VKAQLTGTPQ GTELHSALPT
NRSLSAKGVD SASLNLTSPQ AFGLYQVAVT VTGTAADGSS FERSIPLNIG VVDSATKNPA
NSLPAGR
|
|---|
| |