Gene Haur_2516 details

Gene Information

• Locus tag: Haur_2516
• Symbol: ruvA
• ID: 5734394
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 3213680
• End bp: 3214273
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641279656
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_001545282
• Protein GI: 159899035
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGCAT CGGTACGGGG TGTTGTGCAA TTGATTGGTC AGGATCAAGT GGTAATTGAC 
GTGCATGGTG TGGGTTTAGC CATCGCCGTA CCTCGCACCG TTTTAGCAAC AATTGGCGCG 
ATTGGCGATA CCGCTCAGTT GTATACCCAT TTGCATGTGC GCGAAGATAT GCTGGCCTTA 
TTTGGCTTCA GCTCGCCAGC CCAACGTGCA TTGTTTGAGC TATTACTGGG GGTCAGCGGA 
ATTGGCCCCA AAGTTGCTTT AGCGCTGCTC TCGGCGGCCA CCCCCGAAGA ACTGCAACAT 
GCGATCGCCC GCGAAGATAT CACGATGCTC TCCAAAGTGC CAGGCATTGG CAAAAAAACC 
GCTGCCCGTT TGGTGCTCGA ACTCAAAGGC AAATTTGGAG TCGCTACAAT CAGTCCGCAA 
CTCAGCACCA ACCCAGGCCT GCTAGCACTC AACACCGAAC TGATCGATAT TTTGACCAGC 
CTTGGCTATA GCACTACCGA AGCCCAAGCA GCCCTGAATG CGCTCCCTGC CGATGCTCCC 
GCCGACACTG AAGAACGCCT CCGCTTGGCC TTGCAATATT TTGGTGGGGT GTAA 

 

Protein sequence

MIASVRGVVQ LIGQDQVVID VHGVGLAIAV PRTVLATIGA IGDTAQLYTH LHVREDMLAL 
FGFSSPAQRA LFELLLGVSG IGPKVALALL SAATPEELQH AIAREDITML SKVPGIGKKT 
AARLVLELKG KFGVATISPQ LSTNPGLLAL NTELIDILTS LGYSTTEAQA ALNALPADAP 
ADTEERLRLA LQYFGGV