Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2482 |
Symbol | |
ID | 5734363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3174182 |
End bp | 3174991 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641279622 |
Product | hypothetical protein |
Protein accession | YP_001545248 |
Protein GI | 159899001 |
COG category | [S] Function unknown |
COG ID | [COG5551] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01877] CRISPR-associated endoribonuclease Cas6 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAATGG CGTTAATGCT CCAAATTCGA CCGCTTAGCA ATGCAACGGT TCAGCCTAGT TTGGCTCGGG CAGCGCATGC AGCAATCTTG AATATCATTC GCGAGGCTAA CCCTGATTTA GCCCAACAGG TACACGATGA AGTTGGCGCG AAGCCGCTGA CCGTCTCGAA TGTGCTGGGC ATGCATACGC AGGGCAACCA AGCTACAGTG CAAACCAGTG AAGATTATGG TTTGCGCATA AGTTTGTTGA CTCCAGCTTT AGAGCAGCTG GCCCAAACTT GGCAACCAGA GCAACTAGGA TTCTTGAATC TTGATGGCAG CTCATGGCGA GTTGAGGCGA TTTTGCGCCA TGAGCACGAA CACCCTTGGG TTGGGCAGCG TAGTTATAGC GAATTGCTTG CGCCGAGCAT GGCCCAAGAT TCGATTGCTC ATCGCTGGAC ATTCCAATTT CACTCGCCAG TAACCTTTCG TCAACGGGGC TTGAATCAGC CGATGCCAAC CCCCGATTTG GTATTTGGCA GTTTGCTGGA TAAATGGAAT GCGGTTGCGC CGCTGACCTT TCCCGATGAA TTTAAGCGCT TTGCCAGCGA ATGCATGGCG ACCAGTTATT TTGAATTACG CTCACAGCGA GAGCCAACCA AAAACCAAGC CATTCAAATT GGCGCGGTTG GCCATTGCAC CTACACCGCA ACCTCGCGTG ATCGCTATTG GTGTTCGTGT ATTGACACCT TGGCGCGGTT TGCTTTTTGG AGCGGAGTTG GAGCCGGAAC GACGCGCGGT TTAGGCCGTG CCCGCTTAAT TGAACGCTAA
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Protein sequence | MPMALMLQIR PLSNATVQPS LARAAHAAIL NIIREANPDL AQQVHDEVGA KPLTVSNVLG MHTQGNQATV QTSEDYGLRI SLLTPALEQL AQTWQPEQLG FLNLDGSSWR VEAILRHEHE HPWVGQRSYS ELLAPSMAQD SIAHRWTFQF HSPVTFRQRG LNQPMPTPDL VFGSLLDKWN AVAPLTFPDE FKRFASECMA TSYFELRSQR EPTKNQAIQI GAVGHCTYTA TSRDRYWCSC IDTLARFAFW SGVGAGTTRG LGRARLIER
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