| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2474 |
|---|
| Symbol | |
|---|
| ID | 5734355 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3164172 |
|---|
| End bp | 3165233 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641279614 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_001545240 |
|---|
| Protein GI | 159898993 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTTA TCGAATTACA CAATTTAACC AAGCAATTTG GCCCAACGAC GGTGGTTTCG
CCGCTCAATT TGGCGGTCGA GCGGGGCGAA TTTTTGTCGG TGCTCGGCCC CAGCGGCTGC
GGTAAAACCA CAACGTTACG CATGATCGCA GGCTTCGAGG CTCCCAGCGG TGGCTCAATC
AAAATCGACG GCAACGATAT TACCCAAACG CCCCCCAGCA AACGCAAGAT TGGGATTGTC
TTTCAATCGT ATGCGCTGTT TCCGAATATG AGCGTAGCCC AAAATATCGG TTACGGCCTG
CGCATTGGCA AACTCAGCAA ACAAGCGATT GAGCAGCGGG TCAACGAGAT GCTGGCGATT
ATCCATATGC AAGAATTTGC CAATCGCTAT CCGCATCAAC TTTCTGGTGG CCAACAACAG
CGGGTTGCGC TGGCCCGAGC TTTGGCAATT CGCCCGCAAG TGCTGCTGCT TGATGAGCCA
CTTTCAGCGC TCGATGCCAA AATTCGGGTT TCGTTGCGCC AAGATATTCG GGCAATTCAG
CGCGAATTAG GCATTACGGC GATTTACGTT ACCCACGATC AAGAAGAAGC GCTTTCGCTT
TCGGATCGGG TGCTGATTAT GCAAAAGGGC GAAGTTGAGC AACTTGGTAC GCCCGCCGAA
ATTTACAATA ACCCCAAAAC TAGCTTTGTG GCCCATTTTG TCGGCACACT CAACACGCTG
GAAGCCTCGC TCCACGACCC CAAGCAAGGC ATTTTGCATT TTGGCAAACA ACAATTTAGC
GTCAGCGATA GCTTCGATTC ATCGCTCCAA GGTAGTAAAG TGCGGGTTGC CTTGCGGCCT
GAACGCTTGA GCCTCGAAGG CGTTGCCGCC CAAAATCAAC TGCACGGCGT GGTCAAAGAG
CAAATGCTGT TGGGGCCAAT TGTGCGTTTT CACGTTGAAA TCGAGCAACA ATTGCTGTTT
GTCGATGTCT TCAATGATAC CCACGTTGGC AACTTGCCCA ATCGCGGTGA GGCGGTGGTA
GTCAATTTTG CGCCCCACGA TTGTTTGGTA CTTGAACACT AA
|
|---|
| Protein sequence | MAFIELHNLT KQFGPTTVVS PLNLAVERGE FLSVLGPSGC GKTTTLRMIA GFEAPSGGSI
KIDGNDITQT PPSKRKIGIV FQSYALFPNM SVAQNIGYGL RIGKLSKQAI EQRVNEMLAI
IHMQEFANRY PHQLSGGQQQ RVALARALAI RPQVLLLDEP LSALDAKIRV SLRQDIRAIQ
RELGITAIYV THDQEEALSL SDRVLIMQKG EVEQLGTPAE IYNNPKTSFV AHFVGTLNTL
EASLHDPKQG ILHFGKQQFS VSDSFDSSLQ GSKVRVALRP ERLSLEGVAA QNQLHGVVKE
QMLLGPIVRF HVEIEQQLLF VDVFNDTHVG NLPNRGEAVV VNFAPHDCLV LEH
|
|---|
| |