Gene Haur_2474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2474 
Symbol 
ID5734355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3164172 
End bp3165233 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content52% 
IMG OID641279614 
Productspermidine/putrescine ABC transporter ATPase subunit 
Protein accessionYP_001545240 
Protein GI159898993 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID[TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA TCGAATTACA CAATTTAACC AAGCAATTTG GCCCAACGAC GGTGGTTTCG 
CCGCTCAATT TGGCGGTCGA GCGGGGCGAA TTTTTGTCGG TGCTCGGCCC CAGCGGCTGC
GGTAAAACCA CAACGTTACG CATGATCGCA GGCTTCGAGG CTCCCAGCGG TGGCTCAATC
AAAATCGACG GCAACGATAT TACCCAAACG CCCCCCAGCA AACGCAAGAT TGGGATTGTC
TTTCAATCGT ATGCGCTGTT TCCGAATATG AGCGTAGCCC AAAATATCGG TTACGGCCTG
CGCATTGGCA AACTCAGCAA ACAAGCGATT GAGCAGCGGG TCAACGAGAT GCTGGCGATT
ATCCATATGC AAGAATTTGC CAATCGCTAT CCGCATCAAC TTTCTGGTGG CCAACAACAG
CGGGTTGCGC TGGCCCGAGC TTTGGCAATT CGCCCGCAAG TGCTGCTGCT TGATGAGCCA
CTTTCAGCGC TCGATGCCAA AATTCGGGTT TCGTTGCGCC AAGATATTCG GGCAATTCAG
CGCGAATTAG GCATTACGGC GATTTACGTT ACCCACGATC AAGAAGAAGC GCTTTCGCTT
TCGGATCGGG TGCTGATTAT GCAAAAGGGC GAAGTTGAGC AACTTGGTAC GCCCGCCGAA
ATTTACAATA ACCCCAAAAC TAGCTTTGTG GCCCATTTTG TCGGCACACT CAACACGCTG
GAAGCCTCGC TCCACGACCC CAAGCAAGGC ATTTTGCATT TTGGCAAACA ACAATTTAGC
GTCAGCGATA GCTTCGATTC ATCGCTCCAA GGTAGTAAAG TGCGGGTTGC CTTGCGGCCT
GAACGCTTGA GCCTCGAAGG CGTTGCCGCC CAAAATCAAC TGCACGGCGT GGTCAAAGAG
CAAATGCTGT TGGGGCCAAT TGTGCGTTTT CACGTTGAAA TCGAGCAACA ATTGCTGTTT
GTCGATGTCT TCAATGATAC CCACGTTGGC AACTTGCCCA ATCGCGGTGA GGCGGTGGTA
GTCAATTTTG CGCCCCACGA TTGTTTGGTA CTTGAACACT AA
 
Protein sequence
MAFIELHNLT KQFGPTTVVS PLNLAVERGE FLSVLGPSGC GKTTTLRMIA GFEAPSGGSI 
KIDGNDITQT PPSKRKIGIV FQSYALFPNM SVAQNIGYGL RIGKLSKQAI EQRVNEMLAI
IHMQEFANRY PHQLSGGQQQ RVALARALAI RPQVLLLDEP LSALDAKIRV SLRQDIRAIQ
RELGITAIYV THDQEEALSL SDRVLIMQKG EVEQLGTPAE IYNNPKTSFV AHFVGTLNTL
EASLHDPKQG ILHFGKQQFS VSDSFDSSLQ GSKVRVALRP ERLSLEGVAA QNQLHGVVKE
QMLLGPIVRF HVEIEQQLLF VDVFNDTHVG NLPNRGEAVV VNFAPHDCLV LEH