Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2442 |
Symbol | |
ID | 5734323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 3127139 |
End bp | 3127654 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641279583 |
Product | thiW protein |
Protein accession | YP_001545210 |
Protein GI | 159898963 |
COG category | [S] Function unknown |
COG ID | [COG4732] Predicted membrane protein |
TIGRFAM ID | [TIGR02359] thiW protein |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0147282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAGTT TAATGCAAAA ACAGCGTCAA TCAACGCGAC GCTTGGCCTA TAGCATTGTT TTGGCAGCCT TGGGCTTAGC ACTCTCGCCC ATTAGCATTT CCACCGGCAT TGCCAAAATC TCGCCAACCC AGCATCTGAT CAACGTGTTG GCGGCGGTGT TGGTCGGGCC ATGGTGGGGC TTGGCGATTG CCTTCGTGAT GGCGTTGGTA CGCAATTTGT TGGGTACTGG CACGCCCTTG GCCTTCCCTG GCAGCATGAT CGGCGTGCTT TTGGCGGGCT TGCTCTATCA ACGTTGGCGC AACGATTGGT TGGCAGTGCT TGGCGAGGTG ATTGGCACTG GCCTCATTGG CGCGACTGTG GCGGCGTTGT TGGTTGCGCC GTTGGCAATG GGCAAAAGCC CAGCCTTGAT CGCCATGCTC ACACCGTTTG CAATTTCAGC CTTAGTTGGG GCGTTGTTGG CCTTGGCCAG CCTTGGATTA TTGCGCAAAG CCCGTTTATT GCCCGCCGAT GAGTGA
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Protein sequence | MTSLMQKQRQ STRRLAYSIV LAALGLALSP ISISTGIAKI SPTQHLINVL AAVLVGPWWG LAIAFVMALV RNLLGTGTPL AFPGSMIGVL LAGLLYQRWR NDWLAVLGEV IGTGLIGATV AALLVAPLAM GKSPALIAML TPFAISALVG ALLALASLGL LRKARLLPAD E
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