| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2435 |
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| Symbol | |
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| ID | 5734316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3118970 |
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| End bp | 3120325 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641279576 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001545203 |
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| Protein GI | 159898956 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATCCAT GGGCCAACGA CGTACAATGT TATCAAATTT ATCCCTTAGG GCTTTGCGGC
GCACCAATTC GCAATGATCA AACCAGCGAA CCGATTGCGC GGCTCAAGCA ATTGCACACA
TGGATTGAGC ACTTACAACA TTTAGGCAGC AACTTGCTCT ACCTTGGGCC AGTGTTTGAA
TCGACAGCTC ATGGCTACGA CACAATTGAT TATTTCACGG TTGATCGGCG GCTAGGTAGC
AACAACGATT TACAACAGTT GATTGCAGCA TTCCACGCGG CGGGCATTCG TGTGTTACTC
GATGGCGTGT TTAACCATGT TGGCCGCGAT TTTTGGGCCT TCCGCGATGT ACAAAGCCAT
GGGCAGGCTT CGAGCTATAG CGATTGGTTT GCGGGCTTGG ATTTCAATCA ACACAGCCCA
TATGGCGATC AGTTTAGCTA TCAAGGTTGG CATGGGCACT ACGATTTAGT CAAATTGAAT
TTACACAATC CGGCAGTGCG CGAACATCTT TTCCAAGCAG TCAGCCAATG GATTGCACAA
TTTGGCATCG ATGGCTTACG GCTTGATGCT GCGGATCAGA TCGATCATGA TTTTTTGGCG
GCGCTGGCAG CTCATTGCAA AAGCCTGCGC AGTGATTTTC TATTGATTGG CGAAGTGGTG
CATGGCGATT ATCGCCAATG GGCCAACCCA ACGATGCTCG ATAGCGTGAC CAACTATGAA
GCCTACAAAG GCCTGTATTC CAGCCTGAAT GATCGCAACT ATTTTGAAAT TGCTTACAGT
CTCAATCGTC AATTTGGCGC TGGTGGTATC TATCGGGCTA TGCCGTTGTA TAACTTTGTT
GATAATCATG ATGTCGATCG AATCGCCAGC ACCTTGCACA ATCCAGCCCA TCTCTACCCT
TTACATCTAT TGCTTTACAC CATGCCAGGA ATGCCTGCGC TGTACTATGG CAGCGAATGG
GGCTTGCTCG GCCAGAAAAC CGCCACCAGC GACCAAGCCT TGCGACCAGC CTTGCCTCAA
CCCGACCAAA TTCAGGCCCA ACAACCAGAT TTACTGGCAG CGATTCGCCA ATTGAGCCAG
CTACGCCACG AATATGCTGC CTTACGTTAT GGCGAATATG CCCAAATATA TGTACAGGCT
GAACAGCTTG TGTTTGTGCG TTGGACTAAG CAGCAAACAA TTGTGGTCGC ATTGAATGCC
GCCCCAACCG CCCAAACAAT TCGATTTGTT GTGCCATTTG GTGAAGGCTC ACTGCTTGAA
GATCGCTTGA ATGGCGGGGA AATCAAGGTG CAGCATGGCC AATTACAGCT GACAATTCCC
GCAACCTGGG GCCAAATCTG GCAGCTGATT GATTGA
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| Protein sequence | MHPWANDVQC YQIYPLGLCG APIRNDQTSE PIARLKQLHT WIEHLQHLGS NLLYLGPVFE
STAHGYDTID YFTVDRRLGS NNDLQQLIAA FHAAGIRVLL DGVFNHVGRD FWAFRDVQSH
GQASSYSDWF AGLDFNQHSP YGDQFSYQGW HGHYDLVKLN LHNPAVREHL FQAVSQWIAQ
FGIDGLRLDA ADQIDHDFLA ALAAHCKSLR SDFLLIGEVV HGDYRQWANP TMLDSVTNYE
AYKGLYSSLN DRNYFEIAYS LNRQFGAGGI YRAMPLYNFV DNHDVDRIAS TLHNPAHLYP
LHLLLYTMPG MPALYYGSEW GLLGQKTATS DQALRPALPQ PDQIQAQQPD LLAAIRQLSQ
LRHEYAALRY GEYAQIYVQA EQLVFVRWTK QQTIVVALNA APTAQTIRFV VPFGEGSLLE
DRLNGGEIKV QHGQLQLTIP ATWGQIWQLI D
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