| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2423 |
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| Symbol | |
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| ID | 5734304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 3106551 |
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| End bp | 3107666 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641279564 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_001545191 |
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| Protein GI | 159898944 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.413445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGGC TGATGAATCT GAATGTTATG CAGGCAGCGC TTGAACAAGC TGCGCTGGCG
CTTGGTCGTA CTAGTCCGAA TCCGGCGGTG GGCGCGGTGG TGGTACAGGC GGGCCAAATT
GTTGGGCGCG GCCATACTCA GCCAGCAGGC CAAGCCCATG CTGAGGTGAT GGCCTTGCGC
GAGGCTGGCG AACAAGCTCG TGGTGCAAGT TTATATGTCA CCTTGGAGCC TTGCACGATT
TGGGGGCGCA CCCCGCCTTG TACCGATGCG ATTATTGCCG CTGGAATTGC CGAGGTGATC
ATTGCCTCGC GTGATCCCAA CCCGCGTTTC GAGCACGATG CGGCGACAGT TTTGCAAGCG
GCAGGCATTC GAGTTGGCTT TGCTCCTGAA TATGAAGCGG CGGCAATTGG CCAGACTGAG
GCCTTTCGCC ATTGGATTGT CACCAAACAG CCCTTTGTGA CGGTCAAATA TGCTATGAGT
CTTGATGGCA AAATTGCTAC CCGCACTGGC GATGCCCGTT GGATTAGCGG GCCAGCTTCG
CGCCAAAAAG TTCATGAACT GCGCGACCAA ACTGATGCAA TTTTGGTGGG TATCAACACG
GTATTGGCCG ACGACCCCTT ATTAACCACG CGGCTTGAGC AACATTGGCG GCCAGTGCAA
CACCCCGTGC GTGTTGTGCT CGATGCGCGT GGGCGCATGC CCGCCAGCGC GGCGATGTTG
GCAGATGCTG TGCCTGGCTC AACGATTATT GCCACAACTG CCGCCGCTAG TGCTGCATGG
CGAGCGAGCC TCAACAATGC TGAAATTCTT GAGTTGCCGA GCAATCTTGA GGGTCGGGTT
TCAATTCCGG CCTTGTTGAA CGAGCTTGGT CAACGGGGCA TAAGCTCGTT AATGGTTGAG
GGCGGTGGCG AAACGATAGC GGCATTTTTG GCGGCGCAGG CGGTTCAAAA AGTTCAGGTC
GTAATCGCAC CCAAGATTAT TGGAGGAGTT GCGCCAAGTC CGGTTGCTGG AGTTGGCATT
GCCCGTATGA GCGAAGCGCA GCTTTGGCAA GTACGCAGTA GTGAGCAAAT CGGGGCAGAT
ATTTGGCTTA CCGCCTATCC CAACCCACAG GTATAG
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| Protein sequence | MSRLMNLNVM QAALEQAALA LGRTSPNPAV GAVVVQAGQI VGRGHTQPAG QAHAEVMALR
EAGEQARGAS LYVTLEPCTI WGRTPPCTDA IIAAGIAEVI IASRDPNPRF EHDAATVLQA
AGIRVGFAPE YEAAAIGQTE AFRHWIVTKQ PFVTVKYAMS LDGKIATRTG DARWISGPAS
RQKVHELRDQ TDAILVGINT VLADDPLLTT RLEQHWRPVQ HPVRVVLDAR GRMPASAAML
ADAVPGSTII ATTAAASAAW RASLNNAEIL ELPSNLEGRV SIPALLNELG QRGISSLMVE
GGGETIAAFL AAQAVQKVQV VIAPKIIGGV APSPVAGVGI ARMSEAQLWQ VRSSEQIGAD
IWLTAYPNPQ V
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