Gene Haur_2399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2399 
Symbol 
ID5734280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp3057084 
End bp3058058 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content49% 
IMG OID641279540 
ProductAraC family transcriptional regulator 
Protein accessionYP_001545167 
Protein GI159898920 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAT CGATCAGGCC AATCTATGTA TTGCTCTTGC CGCATGTGCA ATTGCTCGAT 
TGCGCTGGCC CAAGCCAAGT GTTTTTTGAG GCAATGTTGC AAGGCGCAAA CTATCAATTA
ATATTTTGTG GTATAGATTC AGTCGTCACC AGTGCCCAAG GTTTGGTACT ACAAACCCAA
TCGGGCTTAC CCGAAATCCA ACCAGAAGCC ACGATTTTGA TTCCGGGGGT GCAGCTCGAT
TATTACGCCG ATCTCAGTAC TCCAATCGAT CCAAAGATTA CACATTGGCT GCAGGCTAGC
GCTGCGGCTG GCTGTCGAAT TGCCGCAATT TGTAGTGGCG CATTTGTGCT TGGCGAGGCA
GGCCTGCTCG ATAATCGCCC ATGCACAACC CATTGGTCAG CACTGGAATT ATTACAACAA
CGCTATCCCA AAGCTCAAGT ACGCCAAAAT GTGTTATATA TTCAAGCTGA TCGAATTATC
ACCAGCGCTG GAATTAGCAC AGGCATTGAT CTGGCCTTGG CACTGGTTGA ACAAGATTAT
GATGCGTTGT TGGTAGCGAA AATCGCCCGC CAATTGGTGC TGTATCTGCG ACGCAGCGGC
CAGCAAACCC AGCACAGCGT CTATTTGCAA TATCGCAACC ATCTGCATAT CGGAGTTCAT
CGGGTTCAAG ACTATCTTGC CGAACATTTA GCCGAAACGA TCAGCCTTGA ACAACTGGCT
GCAATCGCCA AATTAAGTGT TCGCTCACTC AATCGGGCAT TTCGCACCAC GCTTGGCCTA
ACACCCATTA GCTATCAACA ACAATTACGT TTAGAGCTAG CCGCCAATTT ACTACATAAC
CCCGCTTGGA GCATTGAACA CATCGCGCAG CAAGTTGGGT TCAGCGATAC TCGCCATTTT
CGGCGGCTTT GGCAACGCTA CTTTGGCACA AATCCCACCC AATCACGGCA TACTCAGGAG
CCAAATCAAT GCTAA
 
Protein sequence
MQESIRPIYV LLLPHVQLLD CAGPSQVFFE AMLQGANYQL IFCGIDSVVT SAQGLVLQTQ 
SGLPEIQPEA TILIPGVQLD YYADLSTPID PKITHWLQAS AAAGCRIAAI CSGAFVLGEA
GLLDNRPCTT HWSALELLQQ RYPKAQVRQN VLYIQADRII TSAGISTGID LALALVEQDY
DALLVAKIAR QLVLYLRRSG QQTQHSVYLQ YRNHLHIGVH RVQDYLAEHL AETISLEQLA
AIAKLSVRSL NRAFRTTLGL TPISYQQQLR LELAANLLHN PAWSIEHIAQ QVGFSDTRHF
RRLWQRYFGT NPTQSRHTQE PNQC