Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2399 |
Symbol | |
ID | 5734280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 3057084 |
End bp | 3058058 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641279540 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001545167 |
Protein GI | 159898920 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAT CGATCAGGCC AATCTATGTA TTGCTCTTGC CGCATGTGCA ATTGCTCGAT TGCGCTGGCC CAAGCCAAGT GTTTTTTGAG GCAATGTTGC AAGGCGCAAA CTATCAATTA ATATTTTGTG GTATAGATTC AGTCGTCACC AGTGCCCAAG GTTTGGTACT ACAAACCCAA TCGGGCTTAC CCGAAATCCA ACCAGAAGCC ACGATTTTGA TTCCGGGGGT GCAGCTCGAT TATTACGCCG ATCTCAGTAC TCCAATCGAT CCAAAGATTA CACATTGGCT GCAGGCTAGC GCTGCGGCTG GCTGTCGAAT TGCCGCAATT TGTAGTGGCG CATTTGTGCT TGGCGAGGCA GGCCTGCTCG ATAATCGCCC ATGCACAACC CATTGGTCAG CACTGGAATT ATTACAACAA CGCTATCCCA AAGCTCAAGT ACGCCAAAAT GTGTTATATA TTCAAGCTGA TCGAATTATC ACCAGCGCTG GAATTAGCAC AGGCATTGAT CTGGCCTTGG CACTGGTTGA ACAAGATTAT GATGCGTTGT TGGTAGCGAA AATCGCCCGC CAATTGGTGC TGTATCTGCG ACGCAGCGGC CAGCAAACCC AGCACAGCGT CTATTTGCAA TATCGCAACC ATCTGCATAT CGGAGTTCAT CGGGTTCAAG ACTATCTTGC CGAACATTTA GCCGAAACGA TCAGCCTTGA ACAACTGGCT GCAATCGCCA AATTAAGTGT TCGCTCACTC AATCGGGCAT TTCGCACCAC GCTTGGCCTA ACACCCATTA GCTATCAACA ACAATTACGT TTAGAGCTAG CCGCCAATTT ACTACATAAC CCCGCTTGGA GCATTGAACA CATCGCGCAG CAAGTTGGGT TCAGCGATAC TCGCCATTTT CGGCGGCTTT GGCAACGCTA CTTTGGCACA AATCCCACCC AATCACGGCA TACTCAGGAG CCAAATCAAT GCTAA
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Protein sequence | MQESIRPIYV LLLPHVQLLD CAGPSQVFFE AMLQGANYQL IFCGIDSVVT SAQGLVLQTQ SGLPEIQPEA TILIPGVQLD YYADLSTPID PKITHWLQAS AAAGCRIAAI CSGAFVLGEA GLLDNRPCTT HWSALELLQQ RYPKAQVRQN VLYIQADRII TSAGISTGID LALALVEQDY DALLVAKIAR QLVLYLRRSG QQTQHSVYLQ YRNHLHIGVH RVQDYLAEHL AETISLEQLA AIAKLSVRSL NRAFRTTLGL TPISYQQQLR LELAANLLHN PAWSIEHIAQ QVGFSDTRHF RRLWQRYFGT NPTQSRHTQE PNQC
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