Gene Haur_2394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2394 
Symbol 
ID5734275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp3050631 
End bp3051644 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content52% 
IMG OID641279535 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001545162 
Protein GI159898915 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCG CTCCCGTGCC AACGTCCTTG TCACCCCAGT CATCCGCAAG TAGTGCGGCT 
GAGCCGTTGC TCGATGTTCA GAACCTATCG GTCGAATACC AGACGTTGCG CGGCCCAGTC 
CAAGCTGTTT CCAACGTTTC GTTTAGCATC GGCCAAGGCG AGGTTTTTGG CCTTGCTGGC 
GAGTCGGGCA GCGGTAAATC GACAATTGCC CACGCAATTA TGCGGATTTT GCATTCGCCC 
GCAGTGATTA CTGGTGGCAA TGTGCTATTC GATGGCGATG ATGTGCTTGA AATGGATATG 
GAAGGCCTCG AAGCGTTCCG TTGGCGCGAT ATTTCGATGG TGTTTCAAAG CGCCATGAAT 
GCGCTCAATC CAGTTTTGAC CGTTGGCGAA CAGATTATCG ATGTGATCCA ACGCCATCAG 
CCTAAAACGA CCAAGCAACA GGCCAAAGAT CGTGCCGCCG AATTGCTTGA TATTGTGGGG 
ATCGATGGGA AGCGGGTTGA TGATTATCCG CATCAACTTT CTGGTGGTAT GCGCCAACGG 
GTGGTGATTG CGGTTGCCCT CGCACTCAAA CCACAGTTGA TGATTATGGA CGAGCCAACC 
ACCGCGCTTG ATGTGGTGGT GCAAAAAGAT ATTATGCAGC AAATCGAGTA TCTCAAAAAA 
GAGCTTGATT TCTCGATTTT GTTTATTACC CACGACTTAT CGCTGATGGT CGAGTTTTCC 
GACCGCATCG GTGTGATGTA TGCTGGCGAG ATTGTCGAAA TGACTGCTGC TCACGAGCTA 
TTCAACAAGC CTATGCATCC CTACACCCAA GGCTTGATGG CTTCGTTCCC TGCCTTGGTT 
GGCCCCAAGG AAACCCTGAC TGGGATTCCT GGTTCGCCGC CAAATATGCT CGAACCACCA 
AGCGGTTGTC GCTTTCACCC ACGCTGCCCC AAGGCGATTG CTCAGTGTTC ACTGCAACAA 
CCAACCCTAC GCGAAGTTGA ACCAGGCCAT TTTGTGGCTT GTCACTTGTA CTGA
 
Protein sequence
MASAPVPTSL SPQSSASSAA EPLLDVQNLS VEYQTLRGPV QAVSNVSFSI GQGEVFGLAG 
ESGSGKSTIA HAIMRILHSP AVITGGNVLF DGDDVLEMDM EGLEAFRWRD ISMVFQSAMN 
ALNPVLTVGE QIIDVIQRHQ PKTTKQQAKD RAAELLDIVG IDGKRVDDYP HQLSGGMRQR 
VVIAVALALK PQLMIMDEPT TALDVVVQKD IMQQIEYLKK ELDFSILFIT HDLSLMVEFS 
DRIGVMYAGE IVEMTAAHEL FNKPMHPYTQ GLMASFPALV GPKETLTGIP GSPPNMLEPP 
SGCRFHPRCP KAIAQCSLQQ PTLREVEPGH FVACHLY