| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2390 |
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| Symbol | |
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| ID | 5734271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3044885 |
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| End bp | 3046687 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641279531 |
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| Product | TPR repeat-containing diguanylate cyclase and serine/threonine protein kinase |
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| Protein accession | YP_001545158 |
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| Protein GI | 159898911 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCATG CAACAACTTT AGCGGCCTTA CATGCTGCAT TGGCCGAAAT TCATAATCCA
ATGCAGCATG TCGATGTACT TAACCGATTA GTTGCCGAAC TCCGTTTAGT TGACCATGAA
CAGGCTTGGG CACTCAACCA TCAGGCCGAA GGTTTGGCGC GGATGGCGGG CGACGATGGC
AAGCCTTATA CTCAAGGGTT GATCGATTGT TTCTATTGGC GTTCTAAACT GCTGTTTAGC
GAACAATCGT ATCATCAGGC GTTAACCTAC CTCTTTCGCG CCAGCAAACT GTGCCAATTA
ACCCCGCCCC GCCAGCCTAA CCCGCATTGG CTTGATATCT TAGATACCAG TTTTCAATCA
GCCTCGCTTG GCTCAGAAGA TAGTGATGCA TTTTTAGCTA GCGGCATTCA CAGCGCGGCG
GTACATAATG CCTTGGGCGT GTTGTTGATT GTGCTGGGCA ACTATACCGA AGCTTTGCAA
TATTTGCAGC GGGCCAAACG CGATGCGATC CAATTAAATG ATCAATGGTT TGAGGCTTTG
GTCTGCAATA ATTTGGGCTT TTTGCATTGC GAATTGCAAA GCCCCGAAAT TGCCCTGAAT
GATCTTGCCC ATGGTTTACG TTTGCTTGAA GCCATGGCCC AATTTCCGGC GCATCTGCGC
ATGCGAGCCG AAATTCTCGA TAACAGCGGG CGGGCGGCGT GTGCCTTAAA GCAATTTGAG
CAAGCTGTGA GCTATGGTGA GCAAGCACTG GCACTCTATC ACGAAATCGA TTGGCAACAT
GGCCAGGCCG AGTGTCATAA TAATTTGGGT TTAGCGTATG CTGGGCTTGA TCAACAAAAT
CGAGCAATTG AGCATTTTAT GCAAGCCTAT GAATTAGCTT GTGGCTCGAA CAATATTCAC
GAAGCAATTG AAGCCTTGAT TCGCCATGGA GTTTTGCTTA ATCGAATTAA ACATTATCAA
GCCGCCCGCG TGATTCTTGA GCAAGCTTTG ATTTCAGTCA ATCCTACAAT CAATCAACAA
AAAGTTTATC GGGCACATCA AGCTTTGGCT GATACTTATG AGGCTTTGGG TGATTTTAAA
GCCTCGTTGA AGCACTATAA AGCCTATTAT GAATTAAAAG ATACGGTTTT TAATGAGCAA
TCAGTGCGAC GAATGCAAGT GTTGCAAACG ATGTATCGTT TAGATGAAGC TCGTAATCAA
GCAGCGCTGT ATCATTTGCA AAATGATGAT TTACATCAAC AATTAGCTGA TATTCAACAA
ATTAATTTGC AATTGGCTGA ATGGGCTAAA ACTGACTCAC TGACCGAAAT TCTCAATCGA
CGCGGCTTAT ACGAACAAAT CGACCTCGCT TTGCAACATC AACAAACTGA TGCCCAAGGC
TGGGCTTGGA TTATGTTTGA TATTGATTTT TTCAAGGCGA TTAATGATAG CTATGGCCAC
GATAGCGGCG ACGAGGTGCT GCGCGGGATT GCCCAACGAG CGCGATTGGT GCTGCGCCAT
AGCGATGTCT TTGGGCGCTA TGGCGGTGAG GAATTTTTGG TCTTTTTGCC GCATACCTCG
ATGCAAGAAG CCATTGTGAT TGCCGAACGC TTGCGCACGG CGATTGCCAA CACGCCGTAT
GTGGTTAAGC AAACTGCCGT CAATGTGACA ATTAGCCTTG GAATTGCCTG GACAGAGCAA
GTTGATGACC CTGAACGCCT GACCCAATTA GCCGATCAAG CGTTGTATCG TTCCAAGGCG
GCGGGGCGCA ATTGTTATAC AATTGAGCGT TTTGATGCGC CAGTTAGCCA ACTTTCAGCG
TGA
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| Protein sequence | MNHATTLAAL HAALAEIHNP MQHVDVLNRL VAELRLVDHE QAWALNHQAE GLARMAGDDG
KPYTQGLIDC FYWRSKLLFS EQSYHQALTY LFRASKLCQL TPPRQPNPHW LDILDTSFQS
ASLGSEDSDA FLASGIHSAA VHNALGVLLI VLGNYTEALQ YLQRAKRDAI QLNDQWFEAL
VCNNLGFLHC ELQSPEIALN DLAHGLRLLE AMAQFPAHLR MRAEILDNSG RAACALKQFE
QAVSYGEQAL ALYHEIDWQH GQAECHNNLG LAYAGLDQQN RAIEHFMQAY ELACGSNNIH
EAIEALIRHG VLLNRIKHYQ AARVILEQAL ISVNPTINQQ KVYRAHQALA DTYEALGDFK
ASLKHYKAYY ELKDTVFNEQ SVRRMQVLQT MYRLDEARNQ AALYHLQNDD LHQQLADIQQ
INLQLAEWAK TDSLTEILNR RGLYEQIDLA LQHQQTDAQG WAWIMFDIDF FKAINDSYGH
DSGDEVLRGI AQRARLVLRH SDVFGRYGGE EFLVFLPHTS MQEAIVIAER LRTAIANTPY
VVKQTAVNVT ISLGIAWTEQ VDDPERLTQL ADQALYRSKA AGRNCYTIER FDAPVSQLSA
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