Gene Haur_2386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2386 
Symbol 
ID5734267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp3039256 
End bp3040257 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content51% 
IMG OID641279527 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001545154 
Protein GI159898907 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACTC TCTATTTAAA CGAGCAAGGC ACCCGTTTGG GCAAAAAAGA TGAGCGCTTG 
ATCATCCTAC GTGGTCAAGA GTTGATCAAC GATATTCCAG TAATCAAAGT TGATCGAGTC 
ATTGTGATGG GTCAAGGGGT GCAGGTATCG CATGCCGCAA TTGTATTTCT GGCCCAACGA 
GGAATTCCCT TAATTTTTAC GACCCAATCG GGTGGCTCAC AGAAGGCCAT GGTTTCGGCG 
GGCTTGGGTA ATAATGCGGC TTTGCGCCTC GCCCAATGCC GCATTGTCGA TAACCCCCAT 
TTGGCGGTTC CCTTGGTGCA GGCGATTGTA GTTGGCAAAG TTGCCAATCA AATTCAACTG 
TTGGAGCGTT ATGGCAGCGA TTGGGGTGGG ATGGGGCTAC GTGCCAAACA AACCATGCAG 
CATGTCATTC AACAAACGCA ACACATGCCC GATATCGAGC AATTGCGTGG CCTCGAAGGA 
GCTGGGGCAG CGGCCTATTG GGGCACATGG AGTGCTGTTT TCAAAACTGC CTGGGGTTTT 
GCGGGCCGCG CTTATCGCCC AACCCCCGAC CCATTGAATG CCTTGTTGAG TTTTGGCTAC 
ACACTGCTAC TCAACGATTT GATGACTGCC GTGCAAGCCC TCAGCTTTGA TCCCTATCTC 
GGCGTGTTTC ATACTGTGCA GTTTGGGCGA CCCTCGTTGG CGCTCGATCT CGAGGAGGAA 
TTTCGGCCAT GCATCGTTGA TCGTATGGTG TTGGATGTGC TTGATGCTGG TTTATTGCAA 
ATGAGCAATT TCAGCCGCAC TGAAAAAGGC TTTTTGCTCA ACGATCGGGC GCGTAAAAGC 
TTTATTCAAG CCTATGAGCA ACGCATGCAA ACCCCGATTC GCTATCAAGG CACTGGTAAC 
AACGAGCCAA TGCGACGGGT ACTTTTACTA CAAACTCAGC ATTTAGCGCG GGTTCTGCAA 
GGCGAAGAGC CGCGCTATCA GCCCTATGTT TGGCGTGATT GA
 
Protein sequence
MPTLYLNEQG TRLGKKDERL IILRGQELIN DIPVIKVDRV IVMGQGVQVS HAAIVFLAQR 
GIPLIFTTQS GGSQKAMVSA GLGNNAALRL AQCRIVDNPH LAVPLVQAIV VGKVANQIQL 
LERYGSDWGG MGLRAKQTMQ HVIQQTQHMP DIEQLRGLEG AGAAAYWGTW SAVFKTAWGF 
AGRAYRPTPD PLNALLSFGY TLLLNDLMTA VQALSFDPYL GVFHTVQFGR PSLALDLEEE 
FRPCIVDRMV LDVLDAGLLQ MSNFSRTEKG FLLNDRARKS FIQAYEQRMQ TPIRYQGTGN 
NEPMRRVLLL QTQHLARVLQ GEEPRYQPYV WRD