| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2378 |
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| Symbol | |
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| ID | 5734259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 3029937 |
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| End bp | 3032039 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641279519 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001545146 |
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| Protein GI | 159898899 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.868657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAAAG ATCGTTGTAT GGCTCAATCA CGCCAGTTTG ATCGGGTATT GGCTTTGCTC
GTGCTTGGCC TCAGCTGCTG GACATTATTC TTACCAATGC CAGCCTTATC GAATGCCAAC
GCTCCAGCGG CTTTGGTGCA GGCCAGCCTT GCCACGCTTG ATCAACAGGC TGAGCAACGC
CAAATTGCCG TCATTGCTGC TAGCGTGCTT GATGGCGAAC GTGGCGATTT TGAGCGCCGT
GGCGTGCAAT TGGCCCAACT TAGCCCCGAA CAACAAAGCC AAGTGCGGCG TGAATTGGCG
GTTGATATTG AATTATTGGC CCAAACCTCA CGCGCTGCTG AGCATGAACG TCAAGCCTTG
CAAGCCTACG ATACGGCTTT GATGGGTCAA ACCCGCGATT TAGGCGCATT GGCTGAGCAA
CTACGTTCAG CCACATGGCC AATCGTCGAA CACCTCAAAC TGTATCCACC ACCACTCGGA
ACCCGCAGCG ATTGGCTAGC CCCGAACAGC AACTATTTTC AAACCCGCGC AATTACGATT
AGCAATGGCA CACTTGAACA AGCGACCCAA GCAGCGATTG AGGTTGGTCG GGCCAGTTAT
AGCCAACGCC AACTGCGCGA GCTTGATCAA ACCTATCGAC AGGTGCTTGA CCAATATGCC
CAAACCTTGC AACAAACAAT CACCAGCCAA ACTAATGTGC GGCCATGGTG GCGTTGGGTT
TTGGCAAGTG GTTTAGCCTT GGGTTTTGCA GGTTTGTTGT GGTGGGTTTT ACGCGCTATA
TTAGCCAAAG ATTGGCTGTT GTTGGCGGCG GGCGTGGCGT TGGCGGCATG GTTTGGGCTG
CCATGGCCTG TGGCGTCGAT TGGACTGCTA GCATTAGTTG GCTTAATTGG GTTGCGCCCA
AGTTTAGCGG CTTGTCTGCC ATTGCTCGCA ATTCCGCTGT ATTATCGCGC TCGCTTGGTT
GGCAACTTGA GTTTTCCGCT CAACGAAACC TTGTTTGGCA TCAGTGCTGC TGGCTTGCTA
TTGCATGTGA TTTGGCGTTG GTGGCGTGGT CAACGGCCTG ATGTTGCTTG GTTCAAAACT
AGTTGGTATT GGCCAATTGG GGCAGTAGCG CTGGGTTTGG TGCTGGCGGC TGGGTTGAGC
CTCGGGTCTA GTGGCTTGGT CGAGCCTGCG ACAGCCTTGC GAGAATTGCG GCGCACGATC
ATCGAGCCAG CGATTTGGGC TTGTTTGGCC TTGCTATTAC TGGCAACTCA GCGAGTTAAA
GCGCAAAGCA TGCTCTGGAG CTATATTGTA ATGGCGGCTT GGATCGCTGG TGATGGCTTG
GTGCGCTTTG CCTTGGGCGA AGGCGTTTGG GCCACAACTG GCGTGCCACG CTTGATCGGC
CTGTTGCCAA GCTCGACCGC CTTGGGTGTT TACTTGGGCG CTGGTTTGGC TGGTAGTTTA
GCCTTGGCCT TGAGCGCCGA ATCGGCCAAA CAGCGTCAAT TGGCGTGGTT ACTCAGCCTA
CCACTGAGTT TGGGTGTTTT GTTGACCTTC ACCCGTGGCG CATGGCTGGG CGTGGTTGGC
GCTGTTGCTC TGGTTTTGCT GCTACAACGG CGTTGGCGTT TGTTGCTTGG CGCTGCTGGC
TTAGCTGGTG TTGGTTTAGC GGGCTTTGGC TTGATTCAGC CCAGCTTGCT GGCCCGCGTG
TTGCGGCTTG GCGAGGGCAC TGGCTCAGCT CGCCAAGAAA TTTGGGCTTC AGCCTGGCGA
GCGGTGCAGG ATCAACCACT GCTTGGATTT GGGCTTGATC AATTTGCCCA GCTTGAGCCA
AGCCGCTATG GAATTCCACA GATTCGTTTT TTGACCTTGG CGCATCCGCA TAATCTGCTG
CTTGATGTCT GGTTACAATT AGGCTTGCTC GGTTTGCTGG TAGTTTTGGC CATGCTTGGC
TGGCAGGTTT GGCGTTGGTG GGGCAGCAAA CAGGCTTTGG GGTTGGTGGG GCTGGCAATC
TTGGCAGATT TAGTGATTCA TGGCATGCTT GACCAAACCA TGCTTGGCGG TGATATGATA
TATCTCTGGT GGAGCTTGCT CCTTATCAGT GTTTGGCGGC CATCCGCAAC GGAGGAATCA
TGA
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| Protein sequence | MWKDRCMAQS RQFDRVLALL VLGLSCWTLF LPMPALSNAN APAALVQASL ATLDQQAEQR
QIAVIAASVL DGERGDFERR GVQLAQLSPE QQSQVRRELA VDIELLAQTS RAAEHERQAL
QAYDTALMGQ TRDLGALAEQ LRSATWPIVE HLKLYPPPLG TRSDWLAPNS NYFQTRAITI
SNGTLEQATQ AAIEVGRASY SQRQLRELDQ TYRQVLDQYA QTLQQTITSQ TNVRPWWRWV
LASGLALGFA GLLWWVLRAI LAKDWLLLAA GVALAAWFGL PWPVASIGLL ALVGLIGLRP
SLAACLPLLA IPLYYRARLV GNLSFPLNET LFGISAAGLL LHVIWRWWRG QRPDVAWFKT
SWYWPIGAVA LGLVLAAGLS LGSSGLVEPA TALRELRRTI IEPAIWACLA LLLLATQRVK
AQSMLWSYIV MAAWIAGDGL VRFALGEGVW ATTGVPRLIG LLPSSTALGV YLGAGLAGSL
ALALSAESAK QRQLAWLLSL PLSLGVLLTF TRGAWLGVVG AVALVLLLQR RWRLLLGAAG
LAGVGLAGFG LIQPSLLARV LRLGEGTGSA RQEIWASAWR AVQDQPLLGF GLDQFAQLEP
SRYGIPQIRF LTLAHPHNLL LDVWLQLGLL GLLVVLAMLG WQVWRWWGSK QALGLVGLAI
LADLVIHGML DQTMLGGDMI YLWWSLLLIS VWRPSATEES
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