| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2372 |
|---|
| Symbol | |
|---|
| ID | 5734253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 3021359 |
|---|
| End bp | 3023887 |
|---|
| Gene Length | 2529 bp |
|---|
| Protein Length | 842 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641279513 |
|---|
| Product | cellulose-binding family II protein |
|---|
| Protein accession | YP_001545140 |
|---|
| Protein GI | 159898893 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTACGAC GAATGTATGC TCGTGGAACA TTGTTGGTAT TGTTGATCGC CTTGATCAGC
CTTAGCGTTG CACATCGCAC GGCTACGCCC AGCGCGGCAG CGGCCAGTTG CGTGGTCAGC
TATAAGGTGA TCAATCAATG GGCCGATGGG TTTATTGGCG ATGTGACCGT TACCAATAAT
TTGGCAGCAA CCACAACTTG GCAGTTAAGC TGGACGTTTG CTGGCAATCA GCGGATTGTT
AATCTGTGGA ATGGCGTTTT GACCCAAACT AACGCCGCCG TCAGTGTGCA AAATGCCGCT
TGGAATGGCT CGATCACCAG CGGTGGCAGC GTTAATGTTG GCTTTCAAGC AACATTCAGT
GGCACGAATA GTATTCCCAC GAGTTTTACC CTGAATGGGG TGGTTTGTGG CGAAACTAAC
GTAACGATCA CACCGCCAAC CAGTAACCCA ACCAACACGG CGACGGCGCG GCCCCCAACT
AACACCCCAA TGCCCCCAAC TGGCACTCCG CGTCCATCGA ATACCCCAAC GATTGCTCCA
ACTACCCCAA CCGCAACGCC CAACAACAAT GGCTGTATTG GCGCAATTAT CTGCGACGAT
TTTGAAAACC AAACCGGCAT TGATCCCAGT GGATTTTGGC AAGCGCTCTA TCCTGATTGT
ACTGGCCATG GCTCAGTGAT GGTCGATAAC ACCTATGCCA ATAGCGGCAG CAAATCGATC
ATGGTTCATG GGCATAGTAA TTTCTGTGAT CATGCCTTTT TCGGCAATAC CACGGCGATC
GAAAGCATTG GCAATCTGTT GTATGGCCGC TTTTATGTGC GCCAAGATTT AGCTTTGCCC
GACCATCACA TCACATTAAT GGCGCTCAAA GATCGCAACG ACGCTGATAA TGATTTGCGC
TTGGGCGGCC AGCAAGGGGT GCTCGATTGG AATCGCGAAT CGGATGATGC AACCGCCCCA
TCGATGAGCA GCGCAGGCAT CGCCAAATCG GTCACGATTC CACCTCGTCA GTGGACATGC
GTCGAATTCA AGATCGATAG TGCCAATGGC TATTTGCAGG CCTGGGTCAA CGGCAGCGAA
GTTGAAGGCA TGCGGGTTGA TGGGGTCGAT ACGCCTGATA TTGACCAAGC TTGGCGTACT
CGTGCCAATT GGCAACCACG CTTAGTTGAT ATTCGGTTGG GTTGGGAAAG CTACGGCGGC
GATGATATTA CCCATAATAT TTGGTTTGAT GATGTGGCCC TGGCAACTCA ACGTATCGGC
TGTAGCGCTA GCAACCCAAC TACGCCGACC GCTACTCCGC GCCCAACCAA CACCACCACG
CCCGTGGTTG GCACGCTCAC GCCTAGCCCA ATTCCCAGTG CAACGCCAAC CATCGCGCCC
AATGGCATTA CTGCTGCTAC CACGATTGCC GAGCTTTGCC CAACCTACCG CCAACTCTAT
ATCGATCGTG ATTTTCTCGA TTATTTGCCG AGCGACGGCA GTGGCGGCCA TAACAACATG
CCAGTTGATG GCGGCATGAC TGATGCCCAA AAAGCTAGTT TATACGGCGT GAATATCAGC
GCCATTCAAA GCAAAATTGG CAATGGCACA TTAACTTTGG GCGAATTGGG AACCCAAGCC
TTGGGCCATG TGCAACGCTT AGTCAATCAA AATTTCCCCA AAAATGCGAT TTGTCAGTTG
TTGCCACGCT TGATGCTGCT AGGGCCGGAG ACCGAAACCG CTACCTTCCA CAAAAATAGC
AGCAATCCAT GGGCTGAAAC CGCTGGCCCC GTCAATGCGA TTGCCCCCGC TGGATTTATG
CAAACCCGCT GGCCAACTGA TGCTCGTACC TATGTGCCAG CCGAAAAAGC CGAACGCGAC
CGTTGCCACG ATCAGCCAGT GCATGAAAAT AATCTTGGCT GGACATTTAG CTCGATCGTT
GATCCGAGTA TTTTGTATGA TCCAAATAAT CCAGTGTTGA ACGCAATTCG CACGAGTACC
CACCCAATCA GTGGCTTGCC GATGGGGCCA GGCTTTAGCA GTAATGCGCC GATGCAGGCA
ACGACCAAAC TGCACGAGGA AAATTCGGGT TTCTGGTATC AGGTGATTCA GTTCAAAAAT
ACCAGTACTA TTCCCTATTA CCTCGATTGT GCCATGATTT GGTGGGTCGG GCCATCGGGC
TTATCGTTTG ATTTACGTAA TGGTCATTAT AATAATGAAC AACGCCCTGG CCGTGGCTAT
GGTCACCCAC AGCGCGATAT CATCGAAGTG GTGTACAATC AAACACAAAA GCTCTCGGTG
TATAGCATTC GTTTGTCGTT CCACGATGAG CCGTACAACA TGCGCACGGC CTACCCCAAC
CAATATTGGT CGTTGGAAGT TGGCACGCCC GCCTTTTTGA ATGGACAGGC GCGTTATACC
ACCTCAGCCG AACGCCAAGC CTTGATGGAT TTGATGCTCA ACACATTGCA TGTCGAGCTT
GAAACCAACC TTGATCGCAA TATTGAGCTA TTCGATGCCC TGAAGATGCG TAATCGGGTT
TCGAATTAG
|
|---|
| Protein sequence | MLRRMYARGT LLVLLIALIS LSVAHRTATP SAAAASCVVS YKVINQWADG FIGDVTVTNN
LAATTTWQLS WTFAGNQRIV NLWNGVLTQT NAAVSVQNAA WNGSITSGGS VNVGFQATFS
GTNSIPTSFT LNGVVCGETN VTITPPTSNP TNTATARPPT NTPMPPTGTP RPSNTPTIAP
TTPTATPNNN GCIGAIICDD FENQTGIDPS GFWQALYPDC TGHGSVMVDN TYANSGSKSI
MVHGHSNFCD HAFFGNTTAI ESIGNLLYGR FYVRQDLALP DHHITLMALK DRNDADNDLR
LGGQQGVLDW NRESDDATAP SMSSAGIAKS VTIPPRQWTC VEFKIDSANG YLQAWVNGSE
VEGMRVDGVD TPDIDQAWRT RANWQPRLVD IRLGWESYGG DDITHNIWFD DVALATQRIG
CSASNPTTPT ATPRPTNTTT PVVGTLTPSP IPSATPTIAP NGITAATTIA ELCPTYRQLY
IDRDFLDYLP SDGSGGHNNM PVDGGMTDAQ KASLYGVNIS AIQSKIGNGT LTLGELGTQA
LGHVQRLVNQ NFPKNAICQL LPRLMLLGPE TETATFHKNS SNPWAETAGP VNAIAPAGFM
QTRWPTDART YVPAEKAERD RCHDQPVHEN NLGWTFSSIV DPSILYDPNN PVLNAIRTST
HPISGLPMGP GFSSNAPMQA TTKLHEENSG FWYQVIQFKN TSTIPYYLDC AMIWWVGPSG
LSFDLRNGHY NNEQRPGRGY GHPQRDIIEV VYNQTQKLSV YSIRLSFHDE PYNMRTAYPN
QYWSLEVGTP AFLNGQARYT TSAERQALMD LMLNTLHVEL ETNLDRNIEL FDALKMRNRV
SN
|
|---|
| |