| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2348 |
|---|
| Symbol | |
|---|
| ID | 5734229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2996170 |
|---|
| End bp | 2997375 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641279489 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001545116 |
|---|
| Protein GI | 159898869 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAC ATAGCGGATA TCCGTTTTGG GCAGTTAAAA ATGGCTTATT AAATATCTAC
CCTCGTTTGC AGAACGATTT AACCTGTGAG GTTGTGGTGA TTGGCGGCGG CATTAGCGGA
GCACTGATCG CTCACTACCT CAGCGAGGCT AATATCGATA CGGTAGTGCT GGAAAAACGT
GAGCTTGCTG GGGGCAGCAC TAGCGCCAGC ACCGCCTTGC TGCAATATGA AATCGATACG
CCGCTAACTG AATTGGTTAA ATTGGTTGGC GAGCAACAGG CAGTTCGCGC CTATCACCTA
TGTCGCGAGG CAATTGATAA GGTTGCCGAT TTAGCCCAAA AAGTTGGTGT AGCAGACCAT
TTTTCATACA AAACCAGTTT ATATCTCGCT AGTAGTCGCT GGCATGTCAA ACAATTGCGC
CAAGAATTCG CCTTACGTCA AGCTCATGGC TTCAAACTCG ATTTGCTCGA CAAAGCCGCG
ATTGGCGAAC GGTTTAGTTT TACCGCTCCG GCGGCGCTAT ATTCCTACAG TGCAGGCGAA
GTTGATGCCT TTCAACTATC CCATGCACTT TTCAAGCAGG CGGCGCAACG TGGCGTACAA
ATTTTTGATC GCACGGTTGC CAAAGAATGG CAAAGCAACA GCGACGGTGT AACGGTCACC
ACCGAAACTG GCTATCGCAT TCATGCCAAA TATCTGATTT TGGCGGCGGG CTATGAAGCG
CAACACTATA TCAAGCCCAA GTTGGTGAAA TTTCGCAGTA GCTATGCACT GGCAAGCGAG
CCATTAACCG ATTTTAGTGG CTGGTATGAA CGATGCTTGA TTTGGGAAAG CGCTCGTCCA
TATGTCTACT TGCGTACCAC CAACGAAGGC CGAGCCATTA TTGGCGGCGA AGATGATCAG
ATTGATCTGC CTGCCAAGCG CGATGCCCTA CTCGAACGTA AGGCTGCCAA ATTAACTAAA
CGTTTTAATC AATTGTTTCC GCAGATCCCC TTGCATGTCG ATTATCGCTG GGCTGGAACC
TTTGGCGAAA CCAAGGATGG CTTGCCCTAC ATCGACAATT TGCCCGATCA GCCACGGATT
TTGCTGGCGC TAGGCTATGG CGGCAATGGC ATTACCTATA GCGTGGTCGC CGCCGAACTG
TTGCGTGATC GCGTATGTCA ACGAGCCAAT CCCGATGCAG CGATCTTTCG GCTTGATCGC
AACTGA
|
|---|
| Protein sequence | MDLHSGYPFW AVKNGLLNIY PRLQNDLTCE VVVIGGGISG ALIAHYLSEA NIDTVVLEKR
ELAGGSTSAS TALLQYEIDT PLTELVKLVG EQQAVRAYHL CREAIDKVAD LAQKVGVADH
FSYKTSLYLA SSRWHVKQLR QEFALRQAHG FKLDLLDKAA IGERFSFTAP AALYSYSAGE
VDAFQLSHAL FKQAAQRGVQ IFDRTVAKEW QSNSDGVTVT TETGYRIHAK YLILAAGYEA
QHYIKPKLVK FRSSYALASE PLTDFSGWYE RCLIWESARP YVYLRTTNEG RAIIGGEDDQ
IDLPAKRDAL LERKAAKLTK RFNQLFPQIP LHVDYRWAGT FGETKDGLPY IDNLPDQPRI
LLALGYGGNG ITYSVVAAEL LRDRVCQRAN PDAAIFRLDR N
|
|---|
| |