| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2346 |
|---|
| Symbol | |
|---|
| ID | 5736880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2993349 |
|---|
| End bp | 2994998 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641279487 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001545114 |
|---|
| Protein GI | 159898867 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.705893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TGATTATCGG CGGGGTCGCT GCTGGCATGA GTGCCGCCAC CCGCCTCCGT
CGGCTCGACG AACATGCCGA GATTGTGGTG TTGGAACGCG GCGAGTATGT TTCGTATGCC
AATTGTGGTT TGCCCTACCA TATCGCTGGC ACAATCGCTG AGCGCGAAAA GCTCTTAGTT
GCCAGCCCTG AATATCTGCG CCAAACCTTT AATCTCGACC TACGCTTACA ACACGAGGTG
ATCGCCATCG ATCCTCAGCA AAAAACTGTG ACGATCAAAA CACCCCAACA GCCCACGCCA
ATCCAAGAGC GCTACGATAA ATTGTTGATT GCGGTCGGCA GTCAAGCCTT ACAATTGCCG
ATTCCTGGCA GCGATTTACC CCAAATTCAC ACAGTTCGCA CAATCCCCGA TGTTGATCAG
ATCAATCAAT TATTGGCTGA TGGCGCAGGC CATGCGGTGG TCATCGGCGC TGGCTATATT
GGCCTCGAAA CGATTGAAGC CTTGCAACAG CGTGGCCTAA CCGTCGAGCT AGTTGAGCTG
GCCAAGCAAG TGTTGCCCTT GTTCGATCAT GAGATGGTTA GCGAAGTTGC TGATTTGCTG
CAACAACATG GGGTTAAATT GCATCTTGGG GCCAGCGCTC AACGCTTTGT ACCAACCAAC
CAGCAAATCG CTGTACATCT CAGCGATGGG CGGCAGATCA AAACCGATCT GGTGATTATG
GCGGTTGGGG TGCGGCCAGC CAGCCAATTA GCCCAAACCG CTGGCCTGAC GCTTGGCGAA
CGTGGCGGCA TCGCCGTCAA CCAGCATCTA CAAACCTCCG ACCCAGCGAT TTATGCTGCT
GGCGATGTGA TTGAAGTGCA AGATACGGTG TTGCAACAAC CAGCCTTGAT TGCGCTGGCG
GGGCCGGCTA ACCGCCAAGG CCGCATCGTG GCGGAGCATA TGCTTGGGCG CAGCAGTCGC
TATCATTCCA GCCAAGGCAC GGCGATCGTC AAAGTGCATA CAACCACTTG TGCCATGACC
GGAGCCTCGG AAAAGAGCCT GCAACGCGCC CAACGCGCCT ATCACAAAAT CTATTTGCAC
CCCAATGATC ACGCTGGCTA CTACCCTGAT GCTCAACCAA TGCATCTCAA GCTCTTATTT
GCCCCTGCCG ATGGGAGAAT TCTAGGGGCG CAAATCGTTG GTGGCGCTGG CGTGGATAAA
CGCATCGATG TCTTGGCGAC GGCAATTCGC GCCAAAATGA GCGTCCACGA CTTGACTGAG
CTTGAGTTGG CCTATGCGCC GCCCTATGGC TCGGCCAAAG ATCCCATTAA CATGGCTGGA
TTTTTGGCCA GCAACCTGCT CGATGGCACG GTGAAATTCT GGTATGCCGA GGAATATCCC
GCGATCACTG AGCATGCGCT GATCGTTGAT GTGCGCAACC CTGATGAATA TGCAGCGTGG
CACATTCCAG AAGCGATAAA TCTGCCGCTG GCTGAACTAC GCACCGCGAT TCCAAGCCTC
AAAGCCCAAG CCGAAGGGCG ACCAATTCGC TTACACTGTA TGGTTGGCAT GCGCAGCTAC
ATCGCCTACC GGATTTTGCG CCAAAGCGGC TTCACGAATG TGGCAACGCT AGCTGGTGGC
GCATTGACCT TGAAGGCATT TGGTCATTAA
|
|---|
| Protein sequence | MKIMIIGGVA AGMSAATRLR RLDEHAEIVV LERGEYVSYA NCGLPYHIAG TIAEREKLLV
ASPEYLRQTF NLDLRLQHEV IAIDPQQKTV TIKTPQQPTP IQERYDKLLI AVGSQALQLP
IPGSDLPQIH TVRTIPDVDQ INQLLADGAG HAVVIGAGYI GLETIEALQQ RGLTVELVEL
AKQVLPLFDH EMVSEVADLL QQHGVKLHLG ASAQRFVPTN QQIAVHLSDG RQIKTDLVIM
AVGVRPASQL AQTAGLTLGE RGGIAVNQHL QTSDPAIYAA GDVIEVQDTV LQQPALIALA
GPANRQGRIV AEHMLGRSSR YHSSQGTAIV KVHTTTCAMT GASEKSLQRA QRAYHKIYLH
PNDHAGYYPD AQPMHLKLLF APADGRILGA QIVGGAGVDK RIDVLATAIR AKMSVHDLTE
LELAYAPPYG SAKDPINMAG FLASNLLDGT VKFWYAEEYP AITEHALIVD VRNPDEYAAW
HIPEAINLPL AELRTAIPSL KAQAEGRPIR LHCMVGMRSY IAYRILRQSG FTNVATLAGG
ALTLKAFGH
|
|---|
| |