Gene Haur_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2341 
Symbol 
ID5736875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2989212 
End bp2989895 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID641279482 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001545109 
Protein GI159898862 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.017985 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACGCC CACGCCGCAA ACGCTATCAA GGCATCACGC CACCCCAACA TTGCCCTCCA 
GCCGAGCTAA AAACCGTCAG CGAACTCAGC TTGAGCGATA ACAGCAACTA CGCTCAATTA 
ATTATTCAGC AGCTTAATTT CAATCAACAA CGCGCCAAAG ATATTTTTAT GGAGCAATCG 
CTAGTACGTC AATGCCAATT CAATCAAGTG GTATTGCAAC AATCGCAACT AGTCGATAGC 
AGCTTTGAGC AATGTGATCT AAGCCACGCC AATTGGGAGA AAAGCCACCT AGAGCGGCTA 
GAATGGCGCA ATTCGCGCTT AGGCGGCATG AAATTTGTCG AGGCTCAAGC TGAACATCTG 
GTGTTTAGCA CATGCCAACT TGATTATAGC GTGTGGTGGT CGGCGCGACT TGAGCATGTC 
CGCTTCGAAG ATTGCCGTAT GCTTGAAATC AGTTTTGAAG CAGCCAAACT CAGCGATATT 
TGTTTTCGTA ACTGCGACCT GAGTCGAGCC AATTTTCGCC AAGCAACCCT GAGCAATGTT 
GATATTCGCG GCTCGCAGAT TGGGGGCATG CAAATCGAGC CTAAGCAACT ACAAGGCTTA 
ATTATTGAAC CACGCCAAGC ACTGGAAATT GCCCAATCCT TAGGCTTAAC CATTCGTGAA 
CTAGAAACTG AGGATCAAGC TTAA
 
Protein sequence
MVRPRRKRYQ GITPPQHCPP AELKTVSELS LSDNSNYAQL IIQQLNFNQQ RAKDIFMEQS 
LVRQCQFNQV VLQQSQLVDS SFEQCDLSHA NWEKSHLERL EWRNSRLGGM KFVEAQAEHL 
VFSTCQLDYS VWWSARLEHV RFEDCRMLEI SFEAAKLSDI CFRNCDLSRA NFRQATLSNV 
DIRGSQIGGM QIEPKQLQGL IIEPRQALEI AQSLGLTIRE LETEDQA