| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2335 |
|---|
| Symbol | |
|---|
| ID | 5734207 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2982294 |
|---|
| End bp | 2983109 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641279476 |
|---|
| Product | uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_001545103 |
|---|
| Protein GI | 159898856 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCT TACACGGTCA ACGAATTGCA ATTCTCGAAG CTCGCCGCGC TTCAGAATTA
GCCAACTTGC TCAGTCGCCA TGGTGCGAAC CCAATCCATG CCCCAGCTTT ACGCGAGGTC
AGCGTCGATG CGGCTCCAGT CGCTCAGGCA GTGTTGCAAG AGCTTGAAGC AGGCCAGATC
GATCTGTTGA TTTTGTTGAC TGGGGTTGGC ACGCAGCAAT TAATTGATGC TGCTGCCAGT
GTGGGGCTTG AGCAAGCCAT GTTGACTGGG TTAGCCAAAA CCACCCTCGT TTGCCGTGGC
CCTAAGCCAA CCGCCGTGTT ACGCCGTTAT GAATTACGCC CAAGCATCAG CGCTGCCTCG
CCCTACACCA TCAACGATCT GATCAACAGC CTTGATCAAG TTGAGTTGGC CGAACGTGGC
GTTGGCTTGT TGCACTATGG CGAACGCGAT CGCAAATTAG CCGATTATTG CCGCGAACGC
GGGGCGGTGC TCCACGAACA TAGTGTGTAT GAATGGCAAT TGCCTGCTGA TATCAGCCCA
CTGCTCGCGC TGATCGAACA AGCAATTGCT GGTCAGGTCG ATATTTTTAC CTTTACCAGC
CAAATTCAAG TGCGCCATTT GTTGCACGTT GCCGAGCAAC AAGGCCAAGC CCAAGCATTA
ATTGCGGCCA TGCAACAGGC CTTGGTCGCA GCGGTCGGCC CATCGTGCGC CCAAGCATTA
ATCAATCTTG GCATTCAACA GGTAATTATG CCTGAACAGC CGTTTATGGG CCAGATGGTG
CAACGAATTC TCGACCATGT GAGCGTCAAT ATTTAG
|
|---|
| Protein sequence | MSSLHGQRIA ILEARRASEL ANLLSRHGAN PIHAPALREV SVDAAPVAQA VLQELEAGQI
DLLILLTGVG TQQLIDAAAS VGLEQAMLTG LAKTTLVCRG PKPTAVLRRY ELRPSISAAS
PYTINDLINS LDQVELAERG VGLLHYGERD RKLADYCRER GAVLHEHSVY EWQLPADISP
LLALIEQAIA GQVDIFTFTS QIQVRHLLHV AEQQGQAQAL IAAMQQALVA AVGPSCAQAL
INLGIQQVIM PEQPFMGQMV QRILDHVSVN I
|
|---|
| |