| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2268 |
|---|
| Symbol | |
|---|
| ID | 5734155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2901520 |
|---|
| End bp | 2902761 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641279409 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_001545036 |
|---|
| Protein GI | 159898789 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0458822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCAAC AACGCTGTTG GCTTCGACGC TTAGCTTATT TGATGATCAT CGGTTTGTTA
GGCGGTTGTA TCAGCACCAG TGCCAACCAA CAACCGCTGG TGATCACCTT TGGCGCATCG
ATCTCGATTA CTGGCAAAAC CGCCAAAGAA GGCGAATATG TGCGTGATGG GTATCAATTT
TTTGTTGATA CCCTGAATGC CCAAGGTGGG ATTCTGGTCG GCGGCCAACG CTATCAGTTG
CGTTTACGTT ATTATGATGA TGAATCGAAC CTCGAACGCA CAGCTGAGCT GTATGAAAAA
TTAATCAATC ACGATCAAGT TGATTTTTTA TTGGGGCCAT ATGGCTCGGA TGCTACCAGC
GTTGCGGTAG CGATCGCCGA AAAATATCAT ATTCCATTGG TTTCGGGCCA TGGCTCGGCC
AGCAGCATTT ATGCCAATAA CTATCACTAT ATTTTCAGTG TGCAAACGCC CGCCCGCCAC
TACTTAAACG GAGTGATGGA TGCAGTATTG GCGGCTGACC CAAGCCTCAA AACGCTGGCC
CTGTTGAGCG AAACCGATTC GTTTTCGCAG GATGTCGCCC AAGGTGTGCG TGATTACGCC
CAACAGCGCG GCTTAAACGT GGTTTATCAT GGCGATTATC CCAGCGATGC GCGTGATGTG
AGTCATCATT TAAATATCAT TAAGCAACTT CAGCCCGATA TGTTGCTCGG TGCAGGTCAT
CTGCAAGAGG CTTTGTTAAT TGTCAAGCAA GCCAAAAGCC TCGATCTTAG CCCTAAAGCA
ATTGGATTAA GTGTGGGGCC ATTATTGCCG CAATTTCGCG CTAATTTACA ACATGATGCC
GATTATATCC TTGGCCCAAC CCAATGGACT CCTGCCCTCG ACTATCATGG CGATGATAGC
TGGCAAACCC CAGCGGCTTT TGCCCAAGCC TTTCGTCAGC AATACCCCCA ATATAAATCG
GTGCCCTATC AAGTTGCTGA GTCGGCGGCA TCATTGATCG TCTTTCAACG GGCCTTTGAG
CGGGCAGGAA CGATCGATCG CTTAGCGGTG CGCGATACAA TTAAAGGCTT AAAACTTGAT
ACTTTTTTCG GGCCGATTCA ATTTGACGCG CAGGGCGTAA ACAGCGAAAA GCCCATGGCA
GTTGAGCAGT TGCATCCTGA TGGTCAAAAA TATACGGTAT TTCCCCAAGC CGTGGCCGAA
CAACCACTGT TGTATCCCAT GCCCACGTGG AGTCAACGCT AG
|
|---|
| Protein sequence | MWQQRCWLRR LAYLMIIGLL GGCISTSANQ QPLVITFGAS ISITGKTAKE GEYVRDGYQF
FVDTLNAQGG ILVGGQRYQL RLRYYDDESN LERTAELYEK LINHDQVDFL LGPYGSDATS
VAVAIAEKYH IPLVSGHGSA SSIYANNYHY IFSVQTPARH YLNGVMDAVL AADPSLKTLA
LLSETDSFSQ DVAQGVRDYA QQRGLNVVYH GDYPSDARDV SHHLNIIKQL QPDMLLGAGH
LQEALLIVKQ AKSLDLSPKA IGLSVGPLLP QFRANLQHDA DYILGPTQWT PALDYHGDDS
WQTPAAFAQA FRQQYPQYKS VPYQVAESAA SLIVFQRAFE RAGTIDRLAV RDTIKGLKLD
TFFGPIQFDA QGVNSEKPMA VEQLHPDGQK YTVFPQAVAE QPLLYPMPTW SQR
|
|---|
| |