Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2267 |
Symbol | |
ID | 5734154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2900411 |
End bp | 2901502 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641279408 |
Product | ABC transporter related |
Protein accession | YP_001545035 |
Protein GI | 159898788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCAACA TTCATCACGA TTCAGCCGGA TTAACCATCG AACATCTCAG TAAAATGTAT AATCGCAGTG CCAAAGCGCT TGATGATCTT AGTTTGTCGA TTCAAGCTGG CGAATTGGTC AGCTTTTTGG GGCCATCAGG CTGTGGCAAA ACCACCACAC TCAACTGTAT TGCTGGGCTA GAACATCCCG ACACTGGCAC GATTCGGGTT GGCGATTTCG TGCTGACCGA TAGCGCCAAA AAGCTCTTTT TGCAACCTGA AGATCGCCAA CTTGGCATGG TGTTTCAATC GTATGCACTT TGGCCGCATA TGACGGTTGC CGATAATGTT GGGTTTGGCT TACGGGTCGC TAAAATCGCC AGCAGCGAGA TCAAACAGCG GGTAGCAACA ATTTTAGAGT TGGTTGGATT AGGTCATGTT GCCGAGCGCT ATCCCTTCCA ACTTTCGGGC GGGCAGCAGC AACGGGTAGC GCTAGCCCGC GCGGTGGTAA CTGAGCCACG CCTGCTCTTG CTCGACGAGC CATTATCCAA CCTTGATGCC AAAGTGCGGG AGCAAGCTCG CACATGGCTG CGTGATATTC AAAAACGCCT GGGCATTACC ACCGTCTATG TGACCCATGA TCAAGCTGAA GCGTTAGCGA TGTCTGATAA AATTGCCGTA ATGTCGGCAG GTAAACTTGA GCAATTTGAT ACGCCGCAAG CAATTTATGA ACAACCAGCA ACCCGTTTTG TAGCCGAATT CATTGGAGCA ACCACCTTTT TACCAGCAAC CGTGGTACAG CATGCACCAA CGCTGAGCCA AGTCAGCCTG AGCGATGGCA CATGCCTTGA GGTGCGCACA GCGCTCAAGC TCCAACAACA CCAAACAATT GATTTGGGCA TTCGCTCCGA ACGGGTGCAA GTAGCGACGA GTGATCATCA GACCAACGTG ATTGCTGGGG CAATTCGCAG CTCGGATTAT TTGGGCGCAA AATGGCATCA TCAAGTTGAA ACCACAATTG GAGCCTTGAT GGTCGAGACC TTGGATTACA CCAGTGGCAA TGTGCGAATT TATTTGCCGC CTGAAGCATT GATGGTCTTG AAAGCGGCTT AA
|
Protein sequence | MSNIHHDSAG LTIEHLSKMY NRSAKALDDL SLSIQAGELV SFLGPSGCGK TTTLNCIAGL EHPDTGTIRV GDFVLTDSAK KLFLQPEDRQ LGMVFQSYAL WPHMTVADNV GFGLRVAKIA SSEIKQRVAT ILELVGLGHV AERYPFQLSG GQQQRVALAR AVVTEPRLLL LDEPLSNLDA KVREQARTWL RDIQKRLGIT TVYVTHDQAE ALAMSDKIAV MSAGKLEQFD TPQAIYEQPA TRFVAEFIGA TTFLPATVVQ HAPTLSQVSL SDGTCLEVRT ALKLQQHQTI DLGIRSERVQ VATSDHQTNV IAGAIRSSDY LGAKWHHQVE TTIGALMVET LDYTSGNVRI YLPPEALMVL KAA
|
| |