| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2261 |
|---|
| Symbol | |
|---|
| ID | 5734148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2892650 |
|---|
| End bp | 2895328 |
|---|
| Gene Length | 2679 bp |
|---|
| Protein Length | 892 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641279402 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001545029 |
|---|
| Protein GI | 159898782 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAGT GGTTGCGCCA ATCGCTGCTC CGCCAAGTAT TCAGTGGCTA TTTATTATTT
GGGAGTGTGA TTATTGGGGT TGGTTTAGTG ATGAATGGCA TTGTGCGTCA GCAACTGATG
CGCGAGTTTC AGGCCAGCGA TCAAGCCTTA GGCCAAGCCA TCGCCGTGCA AACCGACAGT
CGGCTGCAAA ATGCCCGCGA TTCATTAGTC GCGTTGGCCG CCTTAGATCC CGAAATCTTT
ACCACAAGCG CCTATCCCGC GATGGAGAAT GCATTTAAGG CCTTCAAGGC AGCCCGCCCA
GATATTGATC GGGTTTATTG GATCGATCGG CGTGGCCATA TGCAAGTTTC AGTTCCCTAC
GATATTCGCA CGCTTGGAAC TGATTTTAGC GAGGAACGAA TTTTTCTGCG GGCAAGTCAA
GCTGATACGC CCTTTATCAA TGGCGGCTCG GTTGATCTAA CCACATTTAA TGCGGTGGCA
ATTATTGCGA TTCCCATTCG TGATCAGCAA AACCAATTTG TCGGAATTTT GGCAACCAAT
GTGCTTTTAG CCGATTTTAG CCAGCCCTTG AATCTGATTG TGAATCAACC AAGCCAGCAA
GCCCAAGGCT TGCGCCTGAG TATGCTTGAT GATCGCGGGA TGTTAATCGC CAGCCAAGAG
CGTGAGCGCT TACTCCAGCC AATTGGCAGC GAAATCCCAG GCGTTGAGGC GGCACTGCTA
GGCCAGCCAA CCAGCCAACT TGGGCTTGAT CTGCAACAAC AGCAATGGTT ATATAGCTCG
GTTCCAGTTC CTAGTGTTGG CTGGGTGGTG ATTGTGCAAC GCCCTGCAAG TGCAGTTTTT
CAAGTTGTCA ATCGCTTTAG CACTTGGCTG TTGGTGGTGG CTTTGTTGTT TGCTGGTGGT
GGTTGGCTTT TCTGGCTTTT TTTGGTGCGC CATATGATTC ATCCCTTGCA TCATTTGGCC
ACGAGCTATC AGCTGGTCGA GCCTACGGTC AATCGCCCGA AAACCAGCCA GCTCAGCGTT
CGCCACGATG AAGTTGGGAC GCTCGCCCGC TCGTTGCAAC GGCTTGATCA GGATATTAGC
AAACGCCTGA GTGAACTTCA AATTTTATTG GAGACCTCGA ATGCAGTGGT CGGCACGCTT
GATCCGCAAA CCGTTATTGA TACAATTACC CATGAAGTGC AGCGCTTAGT TGATAGCCAA
GCGGTTGTGG TTTTAGTGCC CGATGATCAT GGAGCCTTGC GCGTTTTAGC CAGCACAGGC
CGTAGTAAAG CCTATGATCA GACTGTTTCA GTTCAACCAA ATGACCCCTT ATCGCCCTCG
GCTACTGCCT TGCGCCAAGG CCAACCAGTT CAAATGTTGG CCGATAGCGG CGAGTATTTC
CCAGCGTCGA TTGCCAAACA AGGCTTTCGT TCCTTGCTAG CGATTCCGAT TATTAGCCAT
CATGTCGGCA ATGTGGTGGT AATGGTCTAT CGCACCAACG CCCAAGCCTT CGATGCCAAT
GATCTAAAAT TGCTCTTGAT GTTTGCCAAT TACGCAACCC TTGCCTGGGA ACACGCGGTG
TTGTATGAAC GCAGTGATGT GCGCTTACAA GCGGTTGCCC ACGAAAATGA GCAACTTTAT
TTGGCGGCAA CCCATGAAAA ACAAACCTTA GCCGCAATTA TCGATAGTAT GCGCGATGGG
CTGATTCTGG CAGGCGTTGA TGATCGGTTG CTGGTGGCGA ATCCGCGTGC CCGTACACTT
TTAGCGCTTG GCGATGGGGC AATCGATCAG CTAAGCTTAA CTGAAATCTA TCAACGCCTA
CGGCAGCAGG CGGTCGATCA AGCACAGTAT GATCGCGGTT TTGCCCAAGC CCAAAGCCGC
CAGCCGCAGG TTTGGCTGCT CGAAACGGTC AACGATACCA ATACCATTGT TTTTGAGATC
CACCATTTCC ATGTTGGTGA TCAGCAACAG TTGATTGGCT ATGGCTTGGT CTTGCGCGAT
ATTACCCATG AACATGAAGT TGAGCAATTC AAAACAACCC TGCTGGCGGC AGTTGGCCAT
GAGTTACGCA CGCCATTAGC TGCAATTAAA GGCAATGCCT CGACCCTGCT GCAAGATGAT
ATTGTTTGGC CGCTGGCTGA GCAACGTCAC TTTTTAAGCA CGATTAGCAG TGAAGCCGAT
CGCTTGGCCA GTATGGTGAC CAATTTGCTA GATATCTCAC GCTTTGAAGC TGGATTATTG
CCACTCCAGC GTGAATGGTA TGCACTCGAT CAACTGATCG CTGCCGGAAT TCAGCGCGTG
GCCCGTCCAA TCCCACGCTT GGAGCTCGAT TTACCTACTC CAGCCCCAGC GATTTATGTC
GATGCTGCTC GCTTTGAGGT CGTGATTCGC AATTTGGTCG CCAATGGGTT AGCCTATGGC
GAAGGCTTTA TTCAAATTCA GGCTCGTTGT GAGCAACAGC ACTTAATTGT TCAGGTGCGT
GATGATGGCC CAGGCATCGC CAACCATGAT CTGCCCTATG TTTTCCAGCG CTTTTATCGC
GCACACCATG GCATTCAACG TCGTTCGGGT GGCACTGGCT TAGGATTGGC GATCTGCAAG
GCCTTTATTG AAGCTCATGG CGGTAAAATC TGGGGTGAAA ACGATCAGGC TGGAACAACG
ATAGTCTTTC AAATTCCAAT CGTGGGCAAC GCCGGATAA
|
|---|
| Protein sequence | MIQWLRQSLL RQVFSGYLLF GSVIIGVGLV MNGIVRQQLM REFQASDQAL GQAIAVQTDS
RLQNARDSLV ALAALDPEIF TTSAYPAMEN AFKAFKAARP DIDRVYWIDR RGHMQVSVPY
DIRTLGTDFS EERIFLRASQ ADTPFINGGS VDLTTFNAVA IIAIPIRDQQ NQFVGILATN
VLLADFSQPL NLIVNQPSQQ AQGLRLSMLD DRGMLIASQE RERLLQPIGS EIPGVEAALL
GQPTSQLGLD LQQQQWLYSS VPVPSVGWVV IVQRPASAVF QVVNRFSTWL LVVALLFAGG
GWLFWLFLVR HMIHPLHHLA TSYQLVEPTV NRPKTSQLSV RHDEVGTLAR SLQRLDQDIS
KRLSELQILL ETSNAVVGTL DPQTVIDTIT HEVQRLVDSQ AVVVLVPDDH GALRVLASTG
RSKAYDQTVS VQPNDPLSPS ATALRQGQPV QMLADSGEYF PASIAKQGFR SLLAIPIISH
HVGNVVVMVY RTNAQAFDAN DLKLLLMFAN YATLAWEHAV LYERSDVRLQ AVAHENEQLY
LAATHEKQTL AAIIDSMRDG LILAGVDDRL LVANPRARTL LALGDGAIDQ LSLTEIYQRL
RQQAVDQAQY DRGFAQAQSR QPQVWLLETV NDTNTIVFEI HHFHVGDQQQ LIGYGLVLRD
ITHEHEVEQF KTTLLAAVGH ELRTPLAAIK GNASTLLQDD IVWPLAEQRH FLSTISSEAD
RLASMVTNLL DISRFEAGLL PLQREWYALD QLIAAGIQRV ARPIPRLELD LPTPAPAIYV
DAARFEVVIR NLVANGLAYG EGFIQIQARC EQQHLIVQVR DDGPGIANHD LPYVFQRFYR
AHHGIQRRSG GTGLGLAICK AFIEAHGGKI WGENDQAGTT IVFQIPIVGN AG
|
|---|
| |