Gene Haur_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2226 
Symbol 
ID5734113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2830235 
End bp2830867 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content52% 
IMG OID641279367 
ProductTetR family transcriptional regulator 
Protein accessionYP_001544994 
Protein GI159898747 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAA AAACAGCTCC AACCACGCTC TCGATGCGTT CGTTACGTGA ACGCCAGCGT 
GAAGAACGCG CCGCACTGAT TCTTGAGGCA GCTCAGCAGA TTTTTAGCGA AAAAGGCTAT 
GTCGAGGCCT CAATCGACGA GATTGCCGCT CGCACAGGTA TTGCCAAGGG CACTGTTTAT 
TTACATTTTG CCAGCAAGGA AGAGTTGGTG GTGGCCTTGT TCGAGCAACA GTTCAAGCAA 
TTTTTGCAGC AAATTGAGCA TATTCTCAGT GAAGCCATGC CAATGCGTCT GCGGCTTGAA 
CACTTGCTGC TCGATGTCTA TACCCGCATT CAGGCTCAAG GCAACCAAGT GCTGATCGAT 
CTCAACCCAC GGCTGGGATT AACCACCAGC CTGATCAACA AACGGCCTGA TCTTGCGGCC 
TACAGCACCC AAGCCATGGA ATTGATCAGT GGATTGATCA GCGAAGGCCA AACCAATGGC 
GAGCTTGATC CCAAGGTACC AAGCATGGTG ATGGTGGCAA CCTTGGTCAA TATGCTCTCG 
CCCAACAGCT ACGAACGCCT GCTGGCCAGC GGTCTGATCA CGCCAGCCGA ACTAGCGGGC 
TATCTCAGTC GAAGCTTTTT CCCCAAACCT TAA
 
Protein sequence
MEPKTAPTTL SMRSLRERQR EERAALILEA AQQIFSEKGY VEASIDEIAA RTGIAKGTVY 
LHFASKEELV VALFEQQFKQ FLQQIEHILS EAMPMRLRLE HLLLDVYTRI QAQGNQVLID 
LNPRLGLTTS LINKRPDLAA YSTQAMELIS GLISEGQTNG ELDPKVPSMV MVATLVNMLS 
PNSYERLLAS GLITPAELAG YLSRSFFPKP