| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2210 |
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| Symbol | |
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| ID | 5734097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 2808396 |
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| End bp | 2810138 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641279351 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001544978 |
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| Protein GI | 159898731 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCATA GTTTACGCAG GCAAGTTATT GTTATCCTCT TATTGGGAAC ATCGCTCTTG
GCGTTGCTCA ATTTAGCAAT TAATGCTCGT GGCTTGGTGG CAGTGCGCAA CCAAGCCACC
AACGATAGCA CCGCCGCGCT GCAAGCCCAA GCTGAACAAT ATCTCCTGCG CATTGCCCAA
AGCCATGCTG CTAGCACTGG GCAAACAGTC CGCGGTGTGC AACAATTAGC GGTTACCACC
CGCACCTATT TGCAACAACC AACTAATCAA ATTCCAAACT TGCCTGAGTT GAACGTAGCA
CGTAATGGCC GTCAATATGC CAGCGGGGCA ACCACGGTCT TGGTGATTGC TAATCCTGAT
CAGACTCAAG CATTAGCTGA CATTCGCTAT AGTCAACGGC TCGAAGATGT TTTGCCAAGC
TTGCAAATCA GCGTGCCTGA AATTGTGCGC ATCTCATATC TGACGGCCAA CACCTTGCGC
ACCTATCCCA ACATGACTCC CAATGATCCG CCAGCGGATT GGTTGCCTAG CCAAGAGGCG
GCGTATCAAG CAAGTTTGCC TGAGAATAAC CCGAGTCGCG CCTTAGTCTG GACAGAGGTA
CATCAATCGA TTGATCAATC GCAAGCGTTG ATCTCGGTTG CGGCACCAGT TTATGCCAAC
GCCGATTTTT TGGGCACCGT CAGCGTCGAT GTTAGCCTTG ATCGGTTGAG TTTCTATCTC
AAGGGATTAA TCATCGATCA ATCGAGCTTT GCTTTTTTGA TTACCCGTAA TGGTGAAGTT
GTGGCGGTTA CCGAGGCTGG CCAGGGCGGG ATTGTTCAGC AAATTTTGAC CAATCAAGCT
AACATGCCCA GTTCATCAAT GATCAGCGAT CTGCAAGCGG GTCGCGATGG AGTAACCACA
GTCCGCTTGA GTGGGCGCGG CTATGTGGTA GCCTATGCGG CAATTAGCGG TATTCCATGG
GGTTTAGGCT TGGCTTCGCC CTTGGATGAA ATTACGGCGC GAACCACTGA AACCGCCAAC
CAAATTGCCA CGATCACCAA CCAAAGCCTT GGATTGAGCA TCGGTTTGGC TTTGATTGCG
GTTATTTTGT TTGGTTTTGG AATGGCATTG ATTCTGCGCC GCCAATTTCT TAAGCCGCTG
ACTGGCTTAA TTGGGGCAAC CAATCGGGTT GCCGATGGCG ATCTCCAGCC AATTGAGGTT
GAGAGCAATA ATGAATTAGG CCAGTTAGCC AGCTCATTTA ATAGCATGAC TGCTGCTTTA
CAGGTTTCGC GCCAAGAAAC CGAGGCCAAA GAGGCTGCCC GTGAAGCTGC AATGCAGCGC
TTGAGTGAAG TGGTGGTTAA TCTCGAACAC TCACTTGCTG AACGCCAACA GTTATCGCAA
CTGCTGCGTG ATGTTGCCTC ACCAGTCATC CCAATTCTAA AAGGGGTGTT GGTGATGCCA
TTGATTGGCA GTTTGGATGG CGAACGGGTG CAACAAGCCA CCTCAATTCT CTTAACCCGA
GTTGAACGCG AACGCGCCCG CAAAGTGTTG ATTGATATTA CGGGTGTGCC AATGATGGAT
GAGCAAGCTG CTCAAGCGTT GTTGACTATG ATGAATGGCT TGCGTTTGTT GGGAGCCAGT
GTGATTTTGG TAGGGGTTGC TCCTGAAGTT GCCCAAATTC TGACTACCTT GTCGGTGGAT
TTGAGTTCAG TCCAGACCTC AGCCGATTTG CGTACAGCCG TTGCCCAACT AAGTCGTTCG
TAA
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| Protein sequence | MLHSLRRQVI VILLLGTSLL ALLNLAINAR GLVAVRNQAT NDSTAALQAQ AEQYLLRIAQ
SHAASTGQTV RGVQQLAVTT RTYLQQPTNQ IPNLPELNVA RNGRQYASGA TTVLVIANPD
QTQALADIRY SQRLEDVLPS LQISVPEIVR ISYLTANTLR TYPNMTPNDP PADWLPSQEA
AYQASLPENN PSRALVWTEV HQSIDQSQAL ISVAAPVYAN ADFLGTVSVD VSLDRLSFYL
KGLIIDQSSF AFLITRNGEV VAVTEAGQGG IVQQILTNQA NMPSSSMISD LQAGRDGVTT
VRLSGRGYVV AYAAISGIPW GLGLASPLDE ITARTTETAN QIATITNQSL GLSIGLALIA
VILFGFGMAL ILRRQFLKPL TGLIGATNRV ADGDLQPIEV ESNNELGQLA SSFNSMTAAL
QVSRQETEAK EAAREAAMQR LSEVVVNLEH SLAERQQLSQ LLRDVASPVI PILKGVLVMP
LIGSLDGERV QQATSILLTR VERERARKVL IDITGVPMMD EQAAQALLTM MNGLRLLGAS
VILVGVAPEV AQILTTLSVD LSSVQTSADL RTAVAQLSRS
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