| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2204 |
|---|
| Symbol | |
|---|
| ID | 5734091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 2800811 |
|---|
| End bp | 2801818 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641279345 |
|---|
| Product | monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_001544972 |
|---|
| Protein GI | 159898725 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00482964 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC CAACCAACAA GCCGCAAGTT CTGGTAAACT CCGTCGGATA TTCCCGCCGT
GATTTTCTGC GTTTCGGGGC GTTTACCACT GTCGGGCTAC TCGCTGGCTG TGGAACCACC
AGCGCCACGC CGGTAAGCAC CGCCACCCCA ACTAAGCCCA AAATTGGCTT GGTCATGAAA
TCGCTGAGCA ACGAGTTTTT CCAACAAATG CAGGCTGGCG CTGAAGAATA TGCCCGCCAA
AATGCAACCC GCTTTGATTT CACCGCCACC GGCATTAACG ATGAGCGCGA TTTCGCCACC
CAAATTGCTT CATTCGAGCG CTTAGTTAAT GAGCAATATG ATGTGATTGT GTTGGCTCCC
GCCGATTCGA TTGCCTTGGT TGCCCCGGTT GCCAAAGCGG TCAAAGCTGG CATCGTCGTG
ATCAATATCG ACGTTGCGCT TGATGAAGCA ACCAAAAAAG CTGCTGGCAT CGATCTGGCC
TTTTTTGGCC CCGATAATCG TGCCGGAGCC AAAATGTCGG GCGAGGTGCT GGCCAAAGCC
TTAGGCGCAG GCGGCAAAGT CGCAGTGCTC GAAGGCAATC CAGAGGCCGA TAATGCCGTC
CAACGCCGCT TAGGCTTCGA CGATGCCATC GCCGATGGCA GCTTAAATTT AGTTGTTGCT
GAAAGTGGCC ACTGGGAAAC CAGCGAAGGC CAAAGCATTA CCGCCGCATG GCTCAAAAAA
TATCCCGACT TACAAGGCAT CATGTGCGCC AACGATTCAA TGGCTTTTGG GGCAGTCCAA
GCACTCGAAG CCGCCAATCT GCTCGATAAA ATCAAAGTCG TGGGCTTTGA TAACATTCCT
GCTGTGCAAC CCTTGATCAA AGATGGTAAA ATGCTGGCGA CCGTTGAACA ATACGGTGCG
CAAATGGCAG CAATCGGTAT GGATTATGGC TATCGCACGC TCAAAGGCGA GAAATTTAGC
GGCTGGATTC GCACCGAGCT AAAATTAATC ACTAAAGATA ATCTCTAG
|
|---|
| Protein sequence | MEKPTNKPQV LVNSVGYSRR DFLRFGAFTT VGLLAGCGTT SATPVSTATP TKPKIGLVMK
SLSNEFFQQM QAGAEEYARQ NATRFDFTAT GINDERDFAT QIASFERLVN EQYDVIVLAP
ADSIALVAPV AKAVKAGIVV INIDVALDEA TKKAAGIDLA FFGPDNRAGA KMSGEVLAKA
LGAGGKVAVL EGNPEADNAV QRRLGFDDAI ADGSLNLVVA ESGHWETSEG QSITAAWLKK
YPDLQGIMCA NDSMAFGAVQ ALEAANLLDK IKVVGFDNIP AVQPLIKDGK MLATVEQYGA
QMAAIGMDYG YRTLKGEKFS GWIRTELKLI TKDNL
|
|---|
| |