Gene Haur_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2187 
Symbol 
ID5734074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2772073 
End bp2773566 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content43% 
IMG OID641279328 
Productprotein serine phosphatase with GAF(s) sensor(s) 
Protein accessionYP_001544955 
Protein GI159898708 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATGA ACATGCTTTT ACAAAACATC CCAGCGTTTG AAACCATTGC CACGGCTTGG 
CTCAAAACGG GCATTCAAGC ATTTGGCTTA TGGGTTGATA GCCGCTATCA ACAAGTTTGG
CCGCCGAGTA ATACGATCAC AACGGTTGCA TTTCGTGCGC CGCTAGTTGT AAATGGTCAA
GCAATTGGCG AATTACATAT TGCCAGCGAC CGCCAGAATT GTAGCCAAGA ACGACTAGAT
GCTGATGCTG GCTTATTAGC GGCACTTTTG CAATATGAAC ATAATGTCCA TTTATTAACT
GATGAATTAA TTGATTGTCA AGATCAACTT GTTACGTTAT ATGATATTTG GACTTCTATG
GGTCAACATG GTGACTTAAC TGCCCTTATG CAATCGCTGA TGCGCGAGGT CGTTCGATTA
ACCAAAACCT CGAATGCTTG GATTAGTTTT GCTTCAGGTT TAGGCGTACA ACATATTATA
ACCCATGGTT TTGTGCCAAT ATCAGAGCAA ATGTTGCGCT CAATCCAGAC AAATCAGTTT
GCACTATTTA CCAAACACGA TCCAATTTGT CAACATTTAG ATATTGTAAA TCTCTTGTGG
ATGCCTATTA CGATTCGTTC AGTAATTATT GCCGGTGGGC TAGGAATTTG CAATAAAACA
GGTGAGTTTA GTGCAACCGA TATTAAATTT GTTCAAGCAA TTTGTGAGCA TATTAGCCTT
CAACTTGAAC AGCAGATGCT TTATCAAGAA AGTTTAGCCA AGGCTCAAAT GGAATCCGAG
TTAGCCTTGG CGCAACGAGT ACAACAACGT TTGTTGAGCA CTCCTCTGCC AAGTGTGGCC
GATATACAAT TAACTGCCCA TGCCAAACCA GCCCGGATTA TTGGGGGCGA TTTCTATGAT
GTGCTTCAAC GGCCAGATGG AAGCGTTGCC ATTATGGTTG GTGATGTGGT TGGCAAAGGT
GTTGCTGCCG CATTATTGAT GATGCTAAGC CGAACGGCTC TTAGAAATGC TGCGCTGGCA
ACCCATGATC CAGCAGCAAT TCTTGAACGT ACCAATATGG ATCTTTACGA CGACTTAACC
ACGGTTGGGG TATTTATTAC GGTCTTTGTG GCAATTTATC ATCCCAAAAC CCATATGCTG
TGGTATGCAA ATGCTGGCCA TGCCCCTGTA TTGATCTTTC GCAATCAGCA AACCCAGTTG
CTCGAAGCTG ATTGTCCGCC AATAGGAGTG CTGCCACAAC TTTGTGCTGG TAGCCATGCC
CAAATTATGA ATCCAGGCGA TATCCTGATT GGTGCAACTG ATGGCTTTAA TGAAACTCAT
AACCAATATC AAGAGATGTT TGGGTATCAG CGACTCTGCC AACTCCTGAC CCAGCATCAT
GAATTATCAG CAACAGCCTT ATGTAACCTT TTCTTTCAGC AAGTTGAGGC CTTTGGCAAT
AGTTGTGTTC AAGAAGACGA TCGCACAATG ATTATATTAA AGACCAACCC ATGA
 
Protein sequence
MHMNMLLQNI PAFETIATAW LKTGIQAFGL WVDSRYQQVW PPSNTITTVA FRAPLVVNGQ 
AIGELHIASD RQNCSQERLD ADAGLLAALL QYEHNVHLLT DELIDCQDQL VTLYDIWTSM
GQHGDLTALM QSLMREVVRL TKTSNAWISF ASGLGVQHII THGFVPISEQ MLRSIQTNQF
ALFTKHDPIC QHLDIVNLLW MPITIRSVII AGGLGICNKT GEFSATDIKF VQAICEHISL
QLEQQMLYQE SLAKAQMESE LALAQRVQQR LLSTPLPSVA DIQLTAHAKP ARIIGGDFYD
VLQRPDGSVA IMVGDVVGKG VAAALLMMLS RTALRNAALA THDPAAILER TNMDLYDDLT
TVGVFITVFV AIYHPKTHML WYANAGHAPV LIFRNQQTQL LEADCPPIGV LPQLCAGSHA
QIMNPGDILI GATDGFNETH NQYQEMFGYQ RLCQLLTQHH ELSATALCNL FFQQVEAFGN
SCVQEDDRTM IILKTNP