Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2187 |
Symbol | |
ID | 5734074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2772073 |
End bp | 2773566 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641279328 |
Product | protein serine phosphatase with GAF(s) sensor(s) |
Protein accession | YP_001544955 |
Protein GI | 159898708 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATGA ACATGCTTTT ACAAAACATC CCAGCGTTTG AAACCATTGC CACGGCTTGG CTCAAAACGG GCATTCAAGC ATTTGGCTTA TGGGTTGATA GCCGCTATCA ACAAGTTTGG CCGCCGAGTA ATACGATCAC AACGGTTGCA TTTCGTGCGC CGCTAGTTGT AAATGGTCAA GCAATTGGCG AATTACATAT TGCCAGCGAC CGCCAGAATT GTAGCCAAGA ACGACTAGAT GCTGATGCTG GCTTATTAGC GGCACTTTTG CAATATGAAC ATAATGTCCA TTTATTAACT GATGAATTAA TTGATTGTCA AGATCAACTT GTTACGTTAT ATGATATTTG GACTTCTATG GGTCAACATG GTGACTTAAC TGCCCTTATG CAATCGCTGA TGCGCGAGGT CGTTCGATTA ACCAAAACCT CGAATGCTTG GATTAGTTTT GCTTCAGGTT TAGGCGTACA ACATATTATA ACCCATGGTT TTGTGCCAAT ATCAGAGCAA ATGTTGCGCT CAATCCAGAC AAATCAGTTT GCACTATTTA CCAAACACGA TCCAATTTGT CAACATTTAG ATATTGTAAA TCTCTTGTGG ATGCCTATTA CGATTCGTTC AGTAATTATT GCCGGTGGGC TAGGAATTTG CAATAAAACA GGTGAGTTTA GTGCAACCGA TATTAAATTT GTTCAAGCAA TTTGTGAGCA TATTAGCCTT CAACTTGAAC AGCAGATGCT TTATCAAGAA AGTTTAGCCA AGGCTCAAAT GGAATCCGAG TTAGCCTTGG CGCAACGAGT ACAACAACGT TTGTTGAGCA CTCCTCTGCC AAGTGTGGCC GATATACAAT TAACTGCCCA TGCCAAACCA GCCCGGATTA TTGGGGGCGA TTTCTATGAT GTGCTTCAAC GGCCAGATGG AAGCGTTGCC ATTATGGTTG GTGATGTGGT TGGCAAAGGT GTTGCTGCCG CATTATTGAT GATGCTAAGC CGAACGGCTC TTAGAAATGC TGCGCTGGCA ACCCATGATC CAGCAGCAAT TCTTGAACGT ACCAATATGG ATCTTTACGA CGACTTAACC ACGGTTGGGG TATTTATTAC GGTCTTTGTG GCAATTTATC ATCCCAAAAC CCATATGCTG TGGTATGCAA ATGCTGGCCA TGCCCCTGTA TTGATCTTTC GCAATCAGCA AACCCAGTTG CTCGAAGCTG ATTGTCCGCC AATAGGAGTG CTGCCACAAC TTTGTGCTGG TAGCCATGCC CAAATTATGA ATCCAGGCGA TATCCTGATT GGTGCAACTG ATGGCTTTAA TGAAACTCAT AACCAATATC AAGAGATGTT TGGGTATCAG CGACTCTGCC AACTCCTGAC CCAGCATCAT GAATTATCAG CAACAGCCTT ATGTAACCTT TTCTTTCAGC AAGTTGAGGC CTTTGGCAAT AGTTGTGTTC AAGAAGACGA TCGCACAATG ATTATATTAA AGACCAACCC ATGA
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Protein sequence | MHMNMLLQNI PAFETIATAW LKTGIQAFGL WVDSRYQQVW PPSNTITTVA FRAPLVVNGQ AIGELHIASD RQNCSQERLD ADAGLLAALL QYEHNVHLLT DELIDCQDQL VTLYDIWTSM GQHGDLTALM QSLMREVVRL TKTSNAWISF ASGLGVQHII THGFVPISEQ MLRSIQTNQF ALFTKHDPIC QHLDIVNLLW MPITIRSVII AGGLGICNKT GEFSATDIKF VQAICEHISL QLEQQMLYQE SLAKAQMESE LALAQRVQQR LLSTPLPSVA DIQLTAHAKP ARIIGGDFYD VLQRPDGSVA IMVGDVVGKG VAAALLMMLS RTALRNAALA THDPAAILER TNMDLYDDLT TVGVFITVFV AIYHPKTHML WYANAGHAPV LIFRNQQTQL LEADCPPIGV LPQLCAGSHA QIMNPGDILI GATDGFNETH NQYQEMFGYQ RLCQLLTQHH ELSATALCNL FFQQVEAFGN SCVQEDDRTM IILKTNP
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