Gene Haur_2124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2124 
Symbol 
ID5734012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2668466 
End bp2668912 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content51% 
IMG OID641279265 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_001544892 
Protein GI159898645 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAA GCAGTCGATT TGCTGTGGCG GTGCATATTT TGGCCCTGCT TGAAACCAAT 
CCTAATCAAG CTCTTTCCTC AAGCTGTATT GCAGCCAGCG TCAATACCAA TCCGGTCGTT 
ATTCGGCGAA TCTTGGGTAT GCTCAACCGA GCAGGCTTGG TCTATACCGA ATATGGCGCA 
GATGGCGGCA CTCGTTTAGC CCGTTCTGCT GATGAAATTA CGCTCAACGA TATCTATCAT 
GCCACCGAAA ATTGTCGCAT TCTGCCCTTG CATGCTAGCT CGCCCAACCA AGATTGCCGC 
TGTGGGCGCA CGATTCAGCC AGTGCTCAGC ACCATTTTTA GCCATGCCGA GGCTGCCATG 
CAACAAGTAT TGGCCAATAA AAGCCTCGCC GAAGTTGTGA ATGAGATGCA GTGCAAGCCC 
AATCCGTCAG CTTTGCCCCA TTCGTAA
 
Protein sequence
MSASSRFAVA VHILALLETN PNQALSSSCI AASVNTNPVV IRRILGMLNR AGLVYTEYGA 
DGGTRLARSA DEITLNDIYH ATENCRILPL HASSPNQDCR CGRTIQPVLS TIFSHAEAAM 
QQVLANKSLA EVVNEMQCKP NPSALPHS