Gene Haur_2118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2118 
Symbol 
ID5734006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp2659953 
End bp2661059 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content53% 
IMG OID641279259 
Productmonosaccharide-transporting ATPase 
Protein accessionYP_001544886 
Protein GI159898639 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATA CGGTCTTTTT CAGACGGATT CGGGAGAGCC GATTGTTCTG GGTGCTCACC 
GCGTGGGCAG TTATTCTTGG ATTTAATGCG CTGTTTATCC CCGAATTTTT TCGTATCAAC 
ATCCAAGATG GGCATCTCTA TGGCAATCTG ATCGATGTGC TGAACAACGG TGCGCCGCTG 
ATGCTGGTGG CCCTTGGTAT GACGCTGGTG ATCGCCACTG GCGGCGTTGA TCTTTCGGTC 
GGGGCTGTTA TGGCGATCTC GGCGGCTATG GGGGCGGTTC TGATCAACCC CGCGCCTGGT 
GATAAGCTGG TTTCAAATGA GATTCTGACG CGAAACGCCA CCAATACCCC ACTGGCAATC 
ATCGTGCTGG CGACGCTGGC GGCAGGGACA CTGTGTGGTC TTTGGAATGG TCTGTTGGTA 
TCGCGGGCTA AGATTCAGCC ACTGGTCGCA ACTTTGATCC TCATGGTTGC TGGTCGGGGC 
ATTGCCCAGC TGATTACCAA CGGTCAGATT ATCACGATTT ACTACACACC CTACTTCTGG 
TTTGGTAACG GCTATATTTT AGGGCTGCCA GTGTCGATCT ATATCGTCAC GGCGGTAGCG 
ATCATCGCTT GGGTGGGTGT GCGTAAGACA CCGATTGGGC TATTTATTGA AGCAGTCGGT 
ATTAATCCAA AAGCTACCTA CTACAGCGGC ATTAGCGCCA AGAATGTCCA GTTGCTAGCC 
TACACCTTTA GTGGTTTTTG CAGCGCTCTT GCTGGCCTGA TCCTTAGCTC CTATGTGCAT 
AGCGCCGATG GCAACAACAA CGGGCTTAAT TATGAACTAG ACGCGATTTT GGCGGTTGTA 
ATGGGCGGCA CGATGCTGTC TGGTGGGCGT TTTTCACTCT TGGCAAGCGT GCTTGGCGCA 
ATGGTTATCT GGACATTCAC ACTTTCGATG TATACGTTGG GCGTGCCAGC GAACGCCTTG 
CTCGCTGGAC GGGCAGTACT GGTTCTGCTG GTGATCCTGC TCTATTCCGA TCGTCGGCTT 
GTGAAACGTC GCAGTGTGCG TGCGGATACT CAGCCCAAAT CGGCGGTAAT AACACCAGAC 
GAGAATCGAG ATCTCCCGCG CCCATAG
 
Protein sequence
MNYTVFFRRI RESRLFWVLT AWAVILGFNA LFIPEFFRIN IQDGHLYGNL IDVLNNGAPL 
MLVALGMTLV IATGGVDLSV GAVMAISAAM GAVLINPAPG DKLVSNEILT RNATNTPLAI 
IVLATLAAGT LCGLWNGLLV SRAKIQPLVA TLILMVAGRG IAQLITNGQI ITIYYTPYFW 
FGNGYILGLP VSIYIVTAVA IIAWVGVRKT PIGLFIEAVG INPKATYYSG ISAKNVQLLA 
YTFSGFCSAL AGLILSSYVH SADGNNNGLN YELDAILAVV MGGTMLSGGR FSLLASVLGA 
MVIWTFTLSM YTLGVPANAL LAGRAVLVLL VILLYSDRRL VKRRSVRADT QPKSAVITPD 
ENRDLPRP