Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2110 |
Symbol | |
ID | 5733998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2649748 |
End bp | 2651055 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641279251 |
Product | periplasmic binding protein |
Protein accession | YP_001544878 |
Protein GI | 159898631 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.529465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTAAGC AGCGAATGAT CGCCTTATTT GTGGTAGCAG GCTTGATTAG CGCTTGTGGC ACTCAAACTA CACCAACCAC AAATCCAACT AGCCCTGCTG CGCCTGTTAG TAGCACACCA ACTGTTGTAG CTGAAGCGAG TGCTGTGCCA GCAGCAACAA CCCCAGCAAC CAGCGCACCC AGCCCAAGTG CCTGTGTTAG CAATTACGAT AGCGCAACCG ATTACTTCAG CTCCAAAACT AGCCCAAGCT ATGCCAAAGA GTGGACGGTT GAGTATGCTA AGCATTACAA AGTTGTCACG GTTGATCTGG ATACTGACCC AGTTAAAACC GATTTTGATC GCTATATCTT GGTGCAGTGT GGCACACCAG CGCCCGTACT TGAAGGCGAT TTAGCCAATG CCATGGTCGT AACCATCCCA ATTACCCGAG TGTGGGAAGG TGGTAGCAGC ACCTTTGCCG CTATGGATGC CTTGGGCGTG GTCGATAGCT TGAGCGGTGT GGTTGGCTCG ATGACTGGGA GTGCCAACGA GTATCTGCCT TCGATTGCAG CCCAAGTTGC CAAAGCTAGT GTGATCAAAG AAGCCAGCTA TGGCGAAGAT CTCGAATTAA TCGCTGCTGG CAAGCCCGAT ATCTACCTCA ACACCAATGG CCGCGAATGG ATGACCAACG CTCGCCAAGT AGGTATTCCA GCACTACACT ACTCACCATT CTCCGAATCA CCACTTGGCT CGGCTGAGCA AGTTAAATTC TTAGCGTTGT TCTACAACCT CGAAGCCAAA GCTGACGCGA TTTTTACACC AATCGAGCGT GAATATTTGG CACTACGCGA AAAAGCTCAA GCAGCAACCA ACAAACCAAG CGTGCTTATT GGCAATGTAA CCCAAGATGG TCGCTTTGGC ACACGCAACC TTGATCGGTT AGAATCAGTG TTGATGCGTG ACGCAGGCGG CGAATTAGTG TTGACTGATA CCGAATTGAA TCTTGGCGGC GGTAGCACTG GCTTTAGCAG CAGTATCGAT CTCGAAAAAG CAATTGAAAT TGGCGCAAAT GCTGATTTCT GGTTCAACTT GGTTTATGTT CCCAGCGACA ATACTGCCAG TGAATTTATT GCCACGAACC CATTAAACGC CAGCTTTAGC GCCTTACAAA AGGGTAATAG TTTCCATCGT TTTGGCCGTG CCGAGGATTA CTTTAGCAAT GGTGCGGTCT ATGTTGATCA ACTGCTTGCT GATGCAGTCA GTATATTGCA CCCCGAACTT TTGCCCGATC ACGAATTAGT CTTTCTCAAA CGGATTCCTG GCGAGTAA
|
Protein sequence | MFKQRMIALF VVAGLISACG TQTTPTTNPT SPAAPVSSTP TVVAEASAVP AATTPATSAP SPSACVSNYD SATDYFSSKT SPSYAKEWTV EYAKHYKVVT VDLDTDPVKT DFDRYILVQC GTPAPVLEGD LANAMVVTIP ITRVWEGGSS TFAAMDALGV VDSLSGVVGS MTGSANEYLP SIAAQVAKAS VIKEASYGED LELIAAGKPD IYLNTNGREW MTNARQVGIP ALHYSPFSES PLGSAEQVKF LALFYNLEAK ADAIFTPIER EYLALREKAQ AATNKPSVLI GNVTQDGRFG TRNLDRLESV LMRDAGGELV LTDTELNLGG GSTGFSSSID LEKAIEIGAN ADFWFNLVYV PSDNTASEFI ATNPLNASFS ALQKGNSFHR FGRAEDYFSN GAVYVDQLLA DAVSILHPEL LPDHELVFLK RIPGE
|
| |