Gene Haur_2100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_2100 
Symbol 
ID5733988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2624680 
End bp2625684 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content54% 
IMG OID641279241 
Producttransport system permease protein 
Protein accessionYP_001544868 
Protein GI159898621 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTACTCA CGCTCATGTT GATTGGGGTC ATTTTGCTTG GTGTTGCTAT TGGCTCGGTT 
TCAGTGCCCG TGCCGATCGT TGCCAAGATT ATTCTCAACC ACCTGATGCC GAACACAGTT
TCCGTGACAT GGACTCCCAC GCAAGACCAG ATTGTGTGGC AATTTCGCCT GCCGCGGGTG
TTATTAGCCG TCATTGTTGG TGCGGCACTA TCAGTCAGTG GGACAGCCCT CCAAGCCATG
GTGCGAAATC CTCTTGCCGA TCCGTATCTG TTTGGTGTTT CCTCGGGCGC ATCCGTGGCA
GCGGTTGCAG TGCTCACCCT TGGTACTGCT GCTATTGGCG GATTATCCCT GTCGTTCGCG
GCATTCGGTG GGGCCATGCT GACCATGGTT GTGGTCTATG CCTTGGCACA GCAATCGGGT
CGTGTTATCC CAACACGCCT GGTTTTGGCA GGGGTGTCGT TGGGCTATGT GCTCTCAGCG
ATGACCAGCT ATCTCGTGTT GCGCTCAACT ACGCCCTATG GTGGTGCCGC AGCGGTATTA
ACCTGGTTGG CCGGAAATTT GGGCGGCGCA AAGTGGCAGT ATCTTGGTCT TCCCAGCCTT
GCGGTGTTGG GCTCGACAGG ACTTTTAATG CTGCAATTTC GTTCACTGAA TGCGGTCTTA
GCTGGCGACG AAACGGCCAT CAGTCTAGGG GTGAATCTTC ATCGGTTTCG GATACAGCTG
TTTGTGCTGA GTTCGTTGAT GGTGGGAACA GTCGTTGCCA TGAGTGGAGC GATTGGATTT
GTCGGCTTGA TGATACCGCA TATTGTCCGC CTGTTGGTTG GCGTGGATCA TCGCTATGTC
TTGCCAACCA GTGCCTTGTT GGGAGGGGTG TATATGGTGC TGGTTGATTT GATTGGGCGA
ATCGTGATCG CACCCCAAGA ACTGCCCGTT GGTATTGTGA CTGCCATGAT TGGAGGACCC
TTTTTTATCT GGCTTATGCG ACAGCGTTCG GGAGGTGTCG GATGA
 
Protein sequence
MVLTLMLIGV ILLGVAIGSV SVPVPIVAKI ILNHLMPNTV SVTWTPTQDQ IVWQFRLPRV 
LLAVIVGAAL SVSGTALQAM VRNPLADPYL FGVSSGASVA AVAVLTLGTA AIGGLSLSFA
AFGGAMLTMV VVYALAQQSG RVIPTRLVLA GVSLGYVLSA MTSYLVLRST TPYGGAAAVL
TWLAGNLGGA KWQYLGLPSL AVLGSTGLLM LQFRSLNAVL AGDETAISLG VNLHRFRIQL
FVLSSLMVGT VVAMSGAIGF VGLMIPHIVR LLVGVDHRYV LPTSALLGGV YMVLVDLIGR
IVIAPQELPV GIVTAMIGGP FFIWLMRQRS GGVG