Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_2098 |
Symbol | |
ID | 5733986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 2623202 |
End bp | 2623897 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641279239 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001544866 |
Protein GI | 159898619 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATGG CAACGAATGA ACCATCCATT ACGATGTCCA CTACGCGACG ATCCGTTGCG ATTGTGTTGT ATGAAGGCTT CACGGCGCTT GATGCGATTG GCCCCTATGA GGTGTTGGTG AGCCTACCCG ATACCGATGT GTATTTTGTT GCGGATCAGC AGGGACCAAT CTATGCCGAT ACTGGTCAAC TGGCGTTAGT TGCGACGGCG ACATGGGATG AGCTTCCGCA TCCGACGGTG GTTGTGATTC CCGGCGGAGC GGGGACGATG CAGGCTCTTG CACATCAACC CCTTCTGAAT TGGCTTCAGA CGGCAGCTCC GACCGTTGAG TGGATGACCT CAGTCTGTAC TGGAGTGTTT GTCTTAGGAG CAGCGGGATT GTTGCACGGC TTACAGGTGA CCAGCCATTG GACATCGCGC GAGTTTATTC ATCAATATTG TGCTGCAACG TATACCGCCG AACGCTTTAT TCAGCAAGGC AACATTATTA CGGCAGCGGG AGTCTCGGCT GGCATTGATA TGGCTTTATT TTTGGCACAG CAGTTGAGCA GTTCGCAGAC CGCCCAGGCC ATTCAACTGG CGATCGAATA TGATCCACAG CCTCCCTTTT CGGGGGCAGG CGATTTTCAA CAAGCGGATC AGGCCTTAAT TGATGAGACG TATACCGTGT TATCGAAATA TCGGGTGAAG GGGTAG
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Protein sequence | MSMATNEPSI TMSTTRRSVA IVLYEGFTAL DAIGPYEVLV SLPDTDVYFV ADQQGPIYAD TGQLALVATA TWDELPHPTV VVIPGGAGTM QALAHQPLLN WLQTAAPTVE WMTSVCTGVF VLGAAGLLHG LQVTSHWTSR EFIHQYCAAT YTAERFIQQG NIITAAGVSA GIDMALFLAQ QLSSSQTAQA IQLAIEYDPQ PPFSGAGDFQ QADQALIDET YTVLSKYRVK G
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