| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_2054 |
|---|
| Symbol | |
|---|
| ID | 5733942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 2562982 |
|---|
| End bp | 2564682 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641279196 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001544823 |
|---|
| Protein GI | 159898576 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3666] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0120012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC GTGCGGCGTT GTTTGGTGAC TATCCCATTC CTGAGGACAC CGTTGAATTG
GCACACGCCA TTGCTCCACA TGGCAACCGA CTCATGCACC TCCGTGATCA CTTTGGCATG
CTGTTTGACA ATCAGCAATT CAGCACGCTC TTTTCCCATA CTGGTCAACC GGCCCTCGCG
CCAGCACGAC TCGCCATGGT CACCATCCTC CAGTTCATGG AAGATCTCCC CGATCGCCAA
GCCGCCGATG CCGTGCGGAT GCGCATTGAT TGGAAATATG TCTTGGGCCT TCCGCTTGCT
GATCGTGGCT TTGATGCCTC CGTCCTCAGC GAGTTCCGCG CCCGGCTTGT GGCGGGAGAT
GGTGCGTCTA TCCTCTTTGA AACCCTGCTG GAGCGCCTTC GCGATTACGG ATTACTGCGA
ACACGCGGGC AACAACGCAC CGATTCGACC CATGTCCTCG CGGCAGTTCG TGGCCTGAGT
CGCATTGAAT GTCTTGGCGA AACGATGCGT GCCACCCTCA ATGCGCTCGC AACCGTGGCT
CCCGCATGGG TCCGCTGCCA GATTCCACCG CCGTGGTTTG ATCGCTATGG GCCACGTGCT
GATGCATATC GCTTTCCGAA GGCAGCCGCC GACCGTCAAC GTCTTGCCGA GCAGATTGGA
GCCGATGGGT TTGAACTCCT CACCCTCCTT GCGGCACCGA CTGCCCCGCG TGAACTGCAC
GTTCATCCCG CCGTATGCAT CCTTCGTCGC GTTTGGTGGC AACAATACCA TGCCCCCAAT
GGACCAGTTC GCTGGCGTGA AGTGGCTGAT ATGCCACCGA GCAGGATGCG CATTCATTCG
CCCTATGATC GCGATGCGCA GTACAGCACG AAACGCAATA TGGAATGGAC GGGATACAAA
GTGCATCTGA CTGAAACCTT CGATGCTGAT CTGCCCTGCC TCATCACGCA TGTGCTTACC
ACGCCATCCA CGATTCGTGA TGGTGAAGTC TTAGACCAGA TTCATGAGGG CCTTGCTCGC
CATGATCTCC TTCCCAGCAC CCATCTTGTT GATACGGGCT ATACCGATGC AGCAGCGATG
CTCACCAGCC AGTCCACCTA TGGGATTACA CTGTGCGGGC CAATTGCTCG CGATAGTGCC
TGGCAAGCGA AAGACCCGAC CGCCTTCGAT ATCACGCGAT TTCAGGTCGA TTGGGACGCG
AAGGTGGTCA TTTGTCCCCA AGGACACGCA AGTACCAAAT GGATTTCGCA TCAGGATCGA
CACGGGAATC CTGCCATTCG CGTGACGTTT CGACCGCGTG ACTGCCGAGC GTGTCCAGTC
CGAACACAGT GTACGCATAC GGCAACCGCA GCACGAGGCC TTTCGCTCCG CCCCCGAGAA
CAGCATGAAG TCCTTCAGCA GCGGCGGCAC GCCCAAACAA CCGATGCCTT CAAACGGCAG
TATGCAAAAC GGGCGGGAGT CGAGGGACTA ATGTCGCAAG CAACCCGAGT CTGTGGGATG
CGGCAGAGTC GCTATGGTGG GATGGCGAAA ACGCGACTCC AGCATGTGCT GACCGCGTGT
GCGCTGAATC TGCTGAGGAG TGTGGCATGG GTGACCGGTG GGTCGCGTCA CCAAACCCAA
ACGTCGCGCT TTGTGGCCCT CCGTCCACCG CCTGCTCTGT CTCAGATACG TGAACAGACA
CGGCTCCATA GCCACCAATG A
|
|---|
| Protein sequence | MTMRAALFGD YPIPEDTVEL AHAIAPHGNR LMHLRDHFGM LFDNQQFSTL FSHTGQPALA
PARLAMVTIL QFMEDLPDRQ AADAVRMRID WKYVLGLPLA DRGFDASVLS EFRARLVAGD
GASILFETLL ERLRDYGLLR TRGQQRTDST HVLAAVRGLS RIECLGETMR ATLNALATVA
PAWVRCQIPP PWFDRYGPRA DAYRFPKAAA DRQRLAEQIG ADGFELLTLL AAPTAPRELH
VHPAVCILRR VWWQQYHAPN GPVRWREVAD MPPSRMRIHS PYDRDAQYST KRNMEWTGYK
VHLTETFDAD LPCLITHVLT TPSTIRDGEV LDQIHEGLAR HDLLPSTHLV DTGYTDAAAM
LTSQSTYGIT LCGPIARDSA WQAKDPTAFD ITRFQVDWDA KVVICPQGHA STKWISHQDR
HGNPAIRVTF RPRDCRACPV RTQCTHTATA ARGLSLRPRE QHEVLQQRRH AQTTDAFKRQ
YAKRAGVEGL MSQATRVCGM RQSRYGGMAK TRLQHVLTAC ALNLLRSVAW VTGGSRHQTQ
TSRFVALRPP PALSQIREQT RLHSHQ
|
|---|
| |