Gene Haur_1965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1965 
Symbol 
ID5733854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2401925 
End bp2402545 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content51% 
IMG OID641279109 
ProductTetR family transcriptional regulator 
Protein accessionYP_001544736 
Protein GI159898489 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0526053 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACCC AAAACCCTGA AGCATCGCTC AACCAACGCC GCCGAAGCCA AATTCTTGAT 
GCTGCTGCCC AGGTGTTTGC TCAGCAAGGC TTTCATCAAA CCACGATTCG CCAAGTTGCC 
AAGGCCGCAG GCATTGCTGA TGGCACAATT TATCTCTATT TTGCCAGCAA GCACGAGTTA 
CTACTAGGGA TTTTGGAGCG TTTGAACGAT CGCGAACAAC GAGAAATTGA TTTCACCCAA 
GCTCTGGATA GTCGGCCCAG TGGTTTTATT GCCAGCTATT TCGAAGAACG GGTGGGGCGG 
CTGATGGAGC AAATGACTGA TTTGCAGGCA GCTCTGCCAG CGGTGCTGAG CGATGTAAGT 
CTGCGCGAGC GGTATTTTCG CGAAATTTTT GGCCCAACCT TTGAGCTTGC CAATCCAGTT 
GTCCAGTTAT GGATTGATCA GGGGATTTTG CGGCCAGCCC AAGCTGAATT ATTGACCCGC 
TCGCTGGCAA GCAGCATCCT TGGTTTGGTG CTCTTGCGCA TGTTGGGCGA TGAGGTTGCC 
ATCAATCAAT GGCCTGAATT AGCTCGTACC ACCATCAATT TGGTGTTGTA TGGCATTCTC 
CAGGAGCCGC CACATGAGTA G
 
Protein sequence
MATQNPEASL NQRRRSQILD AAAQVFAQQG FHQTTIRQVA KAAGIADGTI YLYFASKHEL 
LLGILERLND REQREIDFTQ ALDSRPSGFI ASYFEERVGR LMEQMTDLQA ALPAVLSDVS 
LRERYFREIF GPTFELANPV VQLWIDQGIL RPAQAELLTR SLASSILGLV LLRMLGDEVA 
INQWPELART TINLVLYGIL QEPPHE