Gene Haur_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1932 
Symbol 
ID5733821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2342052 
End bp2342294 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content51% 
IMG OID641279076 
ProductXRE family transcriptional regulator 
Protein accessionYP_001544703 
Protein GI159898456 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000103733 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGAGG GCATCCTATC TAACCGAATC CGTTTGCTAC GCTTTATTAA TGGCGAAATG 
ACCCAAGCCG ATCTCGGCCA GCGCATCGGG GTTACCCGCC AGACGATTGC GGCAATCGAA
GCAGGCAAAT ACGCGCCGAC CTTAGAAGCA GCCTTTCGGA TTGCTCATGT TTTCCAAGTG
CCATTGGATG AAGTGTTTCA ATGGATACCA CACGATGGCG CAGGGATGAA TTATCAGGGA
TGA
 
Protein sequence
MIEGILSNRI RLLRFINGEM TQADLGQRIG VTRQTIAAIE AGKYAPTLEA AFRIAHVFQV 
PLDEVFQWIP HDGAGMNYQG