Gene Haur_1931 details

Gene Information

• Locus tag: Haur_1931
• ID: 5733820
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 2339802
• End bp: 2341856
• Gene Length: 2055 bp
• Protein Length: 684 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641279075
• Product: alpha beta-propellor repeat-containing integrin
• Protein accession: YP_001544702
• Protein GI: 159898455

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0195615
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTACCC CAAAACCTAT CGTTTATGCC CGCATGCTGC TTGGATTGTT ATTGATTAGC 
ATAAGTTTTG GCCTTGGATT GCCGCGAATC GCCGCCCAAA CTCCCCGTGA CGAGGCAACG 
GAGCGCTTAA ACTCAGCCGA TTGGGCGGCA ATTCAAGGCC TGCTTGCACC AACTACGGCG 
ATCTCTGGCT CCAAATTTCA AGCTGGCTAC TTGAAGGCCG CCCAAGTTTC GGCTGGCGAT 
AGCTTTGGCG CGAGTGTGGC AATTTCTGGC GATACGGTGG TGGTCGGCGT TCCAGCCGAG 
TCAAGCAGTT TGGCAGGTGT GCAAAATAGT GCTACGCCGA CCATCAATGC TTTGGCTGCC 
CAAGCCGGTG CCGCCTATGT GTTTGTACGG GGGAGTGCTG GTTGGCAGCA ACAGGCCTAC 
CTCAAAGCCT CTGAGGTGAG CGCCAATGAT CAATTTGGTT GGAGTGTGGC GATCTCCGGC 
GATACGATTG TGGTTGGCTC ACCGAGAGAG AGCAGTAGTA CGGTTGGCGT GCAAAATAGT 
GCGACACCAA CCGTCAATAA TGATCTTGGT GGGGCTGGCG CGGCCTATGT GTTTGTGCGC 
ACTGGCTCAA CTTGGAGTCA ACAAGCGTAC TTCAAAGCCT CACAAGTTAC ATCTGGCGAT 
TGGTTTGGCT GGAGCGTGGG TTTAGCATCA AACACGATTG TGGTTGGAGC TTATGGCGAA 
GATAGCAATA TCGTTGGCGT GCAAAATAGT GCTACGCCGA CCGTCAATGA AGCGGCTACC 
GCAGCGGGTG CGGCCTATAT ATTTGTGCGC ACTGGCTCAA CTTGGAGCCA ACAAGCCTAC 
CTTAAAGCTG CCCAAATTAA TACTGATGAT GTGTTTGGGT GGAGTGTTGC AGTAGCTGGC 
GATACGGTGA TCGTTGGTGC GCCAGGTGAG GACACCAGCA TTGCAGGAGT GCAACATAGT 
GCTACGCCGA CGGTGGATGA AACAGCTCTC GCAGCAGGGG CAGTCTTTGT ATTTACCCGC 
AGTGGCTCAA GCTGGAGTCC GCAAGTCTTT GTGAAGGCCT CACAGGTTAC ACCTGGCGAT 
CAATTTGGCT ATAATCTGGC GATCGCTGGC AATACGATTG TGGTTGGCGC TCCCTACGAA 
GATTCAAGCA CCTCGGGCGT GCAGCATGGC GCTAGCCCAA GTGTCGATGA GCTAGCATCG 
TTCGCTGGAG CTGCCTTTGT TTATACCCAA AACGCGGGAG TATGGAGCCA ACAAGCCTAC 
CTCAAAGCCT CGAATGTGGC GGATGGTGAT CGCTTTGGCA TGAGTGTGGC GATTGATGCC 
AATACGATTG TGGTTGGTGC GCCGGAAGAG GATAGTGGCA TTGCTGGGGT GCAAAATAGT 
GCACTACCCA ACGCTGATGA GAGCGCCATC CAAGCAGGAG CCGCCTATGT GTATGCACGG 
AATGCTACAA CTTGGAGCCA GCAAAGTTAT CTAAAGGCTT CGCAGGTTTC GACTGGCGAT 
TATTTTGGGC GTGGGGTTGG GGTGGCGGGC GATATGCTGG TGATTGGGAT TCCGCTTGAA 
GATAGTGCTC GCAGTGGCAT CCAAAATAGT GCTACGCCGA GTGTTGATGA ACTTGCTGCT 
GATTCAGGTG CGGCCTTAAT TATTGATACA ACCTATCGTT CGTATAGCCC GTTGGTTCAG 
CGCATGACCC TCTTGGCCTT GCTTACGATC AATTCGACGG CTATTCCCAT TCGGGCGGTG 
ACGCAACAGG GCGAAGTATT TGCAAGCTTC ACGGCAACAT TGCCTACCAC GATTCCAGCT 
GGTGGCCATA TTTATCTTTC GGCTAGCCCT AGCTCGTTGC AACCAACCTT GGTCGATGAT 
CGGATTATCA TTCGCGATGG GGCTAACATA ATTTTTCAAC ATACCTACGA TCTTGAGAGC 
AATGGCGAGC TTGTTGAGAT TCCGTGGGAA GTTATTAATG CGGCTAGCGG CCATAGCCTG 
ACGATCACTT TTGTTGATGT CTCGGCAGGG TTGGTTGGGG CAACGCCGAT CTATCTGATT 
TGGGTGGCTG AGTAG 

 

Protein sequence

MSTPKPIVYA RMLLGLLLIS ISFGLGLPRI AAQTPRDEAT ERLNSADWAA IQGLLAPTTA 
ISGSKFQAGY LKAAQVSAGD SFGASVAISG DTVVVGVPAE SSSLAGVQNS ATPTINALAA 
QAGAAYVFVR GSAGWQQQAY LKASEVSAND QFGWSVAISG DTIVVGSPRE SSSTVGVQNS 
ATPTVNNDLG GAGAAYVFVR TGSTWSQQAY FKASQVTSGD WFGWSVGLAS NTIVVGAYGE 
DSNIVGVQNS ATPTVNEAAT AAGAAYIFVR TGSTWSQQAY LKAAQINTDD VFGWSVAVAG 
DTVIVGAPGE DTSIAGVQHS ATPTVDETAL AAGAVFVFTR SGSSWSPQVF VKASQVTPGD 
QFGYNLAIAG NTIVVGAPYE DSSTSGVQHG ASPSVDELAS FAGAAFVYTQ NAGVWSQQAY 
LKASNVADGD RFGMSVAIDA NTIVVGAPEE DSGIAGVQNS ALPNADESAI QAGAAYVYAR 
NATTWSQQSY LKASQVSTGD YFGRGVGVAG DMLVIGIPLE DSARSGIQNS ATPSVDELAA 
DSGAALIIDT TYRSYSPLVQ RMTLLALLTI NSTAIPIRAV TQQGEVFASF TATLPTTIPA 
GGHIYLSASP SSLQPTLVDD RIIIRDGANI IFQHTYDLES NGELVEIPWE VINAASGHSL 
TITFVDVSAG LVGATPIYLI WVAE