Gene Haur_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1924 
Symbol 
ID5733813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp2321536 
End bp2322180 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID641279068 
Productpeptidase M50 
Protein accessionYP_001544695 
Protein GI159898448 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.434385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATC CACAGGCTGG CTATCCATTT CGCTCAGATA ACAAACCCCG CAACGAACTT 
TTTGAATTTG CCAAGGCTTG GCTGGGCACA ACCCTGGCTT TTGCCTTGGT ATATCGAAAT 
ATTATGCCAT TGCGTGATGC CGTGATTATT ATGGGGATTG CCGCTGGCCT TGGCATCGTC 
ATCCACGAAT TGGCCCATCG CGTCGTTGCG CGGCGCTTTG GCAGCGAAGC GCATTTTTTT 
GCCAACGATG CCATGTTGGT GATTTCGGTG CTGCTGGCAT TAACTGGATT TATCTTTGCC 
GCACCTGGGG CTGTGCATCA TCGTGGTTAT TTGACCAAAA AACAGCTTGG GTTGGTGGCA 
GCGGCTGGGC CAGCCAGCAA TATGGTCATC GCGCTGCTTT CGTTGCTGCT CATTCCAATC 
GCTAATACTC TCAACATCCA ATTTCTGTTT AAGATTTCCG TCTACAGCTA TGTGGTCAAT 
TCACTACTGG GGATTTTTAA TATGATCCCT TATGGGCCAT TGGATGGCGC TAAAATTATG 
GACTGGGACA TGCGGGCATT TATTGCCATG GCCTCAGTTG GCGGGCTGTT GTTTGTTGTA 
CAATACCTGC CGATTGCCAC AAACTTATTT GTTTTTGGCT TCTAA
 
Protein sequence
MFNPQAGYPF RSDNKPRNEL FEFAKAWLGT TLAFALVYRN IMPLRDAVII MGIAAGLGIV 
IHELAHRVVA RRFGSEAHFF ANDAMLVISV LLALTGFIFA APGAVHHRGY LTKKQLGLVA 
AAGPASNMVI ALLSLLLIPI ANTLNIQFLF KISVYSYVVN SLLGIFNMIP YGPLDGAKIM 
DWDMRAFIAM ASVGGLLFVV QYLPIATNLF VFGF