| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1921 |
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| Symbol | |
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| ID | 5733810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2317173 |
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| End bp | 2318960 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641279065 |
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| Product | RNA-directed DNA polymerase |
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| Protein accession | YP_001544692 |
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| Protein GI | 159898445 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3344] Retron-type reverse transcriptase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCACAG CCGACACTAT TTTGGCAGTC ATTCGTGATC GTGGGCAACG AGGATTGCCC
TTAGCGCGTG TCTATCGCAT ATTGTTCAAT GAGGATCTCT ATTTGCGTGC CTATGGGCGG
CTAGCAACCA AACAAGGCGC ACTCACCAAA GGAAGTACAG ACGAAACTAT TGATGGAATG
TCAATGGCGA AAATTCATCG TATCATCGCC GATCTTCGCC GCGAGACCTA TCGCTGGACT
CCAGTACGAC GGGTCTACAT CCCAAAAGCA ACGGGAAAAA CCCGACCTTT AGGGGTTCCT
ACATGGTCAG ATAAGTTGGT TCAGGAAGTC TTACGCTCCA TTCTCGACGC GTATTACGAC
CCCCAAATGA GCGACCATTC ACATGGTTTT CGTCCGAACC GTGGATGCCA TACGGCTCTT
AAAGCCATTC AGCGTTGCTG GACGGGCACA CGGTGGTTTA TTGAGGGTGA TATTGCACAA
TATTTTGACA CGATCAATCA CACGACACTC CTCACAATAT TGGCGAAACG CATCCACGAT
GGCCGTTTTC TTCGGTTGAT CCAGACACTC TTGCAGGCAG GATATCTTCA CGATTGGGTG
TATCATCCGA CGCTGAGTGG AACACCACAA GGCGGGGTAA TCTCCCCACT CTTGGCAAAC
ATTTACCTGC ATGAATTTGA CCAGTTTGTC GAACATACGC TGATACCTGC CTATACCAAA
GGGCAGAGAC GGAAAGTCAA TCCGGCCTAT GCACAGATGG AACAACGAAT CAGCAAATTA
CGTCGTCAAC GGGAGTACGC AAGCGTTACC CCGCTCCTGA AGGAGCTTCG CACCCTGCCC
TCCCGTGATG TGCATGATCC TGATTACCGA CGGTTACGCT ATGTGCGGTA TGCCGATGAC
TTTCTCCTTG GGTTTGCGGG AACAAAAGTG GAAGCAGAGG CGATCAAACA GCAGATTAAT
GTATGGCTGT ATGATCATCT CCAATTAAAA CTGTCCACTC AGAAAACGCT GATCACGCAC
GCAAGTAGTG ATCCAGCCCA TTTTCTTGGC TATGACATCG TGACGCAACA GGCAAATAGC
AAACAGACGG GAAACCGACG CATTGTGAAT GGCCGGATCG CGTTACGCGT AGCCCGCGCA
ACGATTACTG CGAAATGCAA CCGCTATATG AAAAACGGGA AGGCTACCCA CCGACCCGAA
CTGCTGAGCG AAACCGACTT TACTATTATT GCAACGTATC AGCAGGAATA TCGTGGCATT
GTGCAATATT ACATGCTTGC CCACAATGTA TCGCATTTGC ACCGCCTGCA TTGGGTTATG
AAGCAATCCT TGCTCAAAAC ACTGGCTGCC AAACACAAAA CAACTAGTGC CGTGATGCGA
AGGAAATATC TGGCAACACA GCAGTTGCCT GACGGGCGCA GAATGCTCTG CATTCGCGTA
TTCGTCGAGC AACCAGCACG ACCGCCACTC ATAGCTCAAT TTGGTGGGAT TTCTTTGCGC
CGCAATCCAA TGGCAATCCT CAATGAACGT CCACCCCAAC TATGGAATGT GGGAACCGAA
ATTATCCAAC GCTTGAAAGC GCAAGAATGC GAGCTATGTG GAAGCCATGA AGATGTGGAA
GTCCACCATA TCCGCAGGCT TGCCAACCTA AAGCGATCGG GACGAACGGA AAAACCACAA
TGGATGCAAC GCATGATTAC GCGGCAACGA AAAACGCTCG TAGTCTGTTC TCAATGTCAC
CACCGCATCC ATGCTGGAAA AACACTACCA CAGCAAATCA CGAAATAA
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| Protein sequence | MRTADTILAV IRDRGQRGLP LARVYRILFN EDLYLRAYGR LATKQGALTK GSTDETIDGM
SMAKIHRIIA DLRRETYRWT PVRRVYIPKA TGKTRPLGVP TWSDKLVQEV LRSILDAYYD
PQMSDHSHGF RPNRGCHTAL KAIQRCWTGT RWFIEGDIAQ YFDTINHTTL LTILAKRIHD
GRFLRLIQTL LQAGYLHDWV YHPTLSGTPQ GGVISPLLAN IYLHEFDQFV EHTLIPAYTK
GQRRKVNPAY AQMEQRISKL RRQREYASVT PLLKELRTLP SRDVHDPDYR RLRYVRYADD
FLLGFAGTKV EAEAIKQQIN VWLYDHLQLK LSTQKTLITH ASSDPAHFLG YDIVTQQANS
KQTGNRRIVN GRIALRVARA TITAKCNRYM KNGKATHRPE LLSETDFTII ATYQQEYRGI
VQYYMLAHNV SHLHRLHWVM KQSLLKTLAA KHKTTSAVMR RKYLATQQLP DGRRMLCIRV
FVEQPARPPL IAQFGGISLR RNPMAILNER PPQLWNVGTE IIQRLKAQEC ELCGSHEDVE
VHHIRRLANL KRSGRTEKPQ WMQRMITRQR KTLVVCSQCH HRIHAGKTLP QQITK
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