| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1912 |
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| Symbol | |
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| ID | 5733801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2306059 |
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| End bp | 2306571 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641279056 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001544683 |
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| Protein GI | 159898436 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000283047 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGTTG ACGCAGCGCC GCTGGCCGAG GCTGCCCTAA GGGAATGCTT AGCCGAGTGG
TTTGAGAACT ATCACCTCGC GCTATTTCGG TATCTTGTGC GATTGATTGG GGATGAGGAA
CAAGCAGCAG ATATCGTGCA AGATACGTTT GCCCGGGCGC TTGTTGCCTT GCGTACTCAG
ACACTTCCGC TATACCCCTA CGCATGGCTC TGTCGGATTG GCGGCAATTT GGTGATTGAT
ATGCTGCGGC GCAAGCGTCG CTGGCGTTGG CTACCCTTTC AGACAAGTAC ACCATCCCAT
GATCAAGCAA TTGCAACTGC TCATGATGTG CGTGATTGTC TTGTGCGCCT AAACCGACGT
GAAGCCGAAC TGCTCATCTT AGCCCACTGT GTTGGCCTTA GCCCGAGCGA AATTGCGGCA
ATGCTGGATG AAAATGTCTC AACGGTGCGT GTACGCCTGC ATCGTGCCCG TCATCACTTC
CGCGATCTGT ATACCAAGGA GGAAGGCTCG TGA
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| Protein sequence | MVVDAAPLAE AALRECLAEW FENYHLALFR YLVRLIGDEE QAADIVQDTF ARALVALRTQ
TLPLYPYAWL CRIGGNLVID MLRRKRRWRW LPFQTSTPSH DQAIATAHDV RDCLVRLNRR
EAELLILAHC VGLSPSEIAA MLDENVSTVR VRLHRARHHF RDLYTKEEGS
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