Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1908 |
Symbol | |
ID | 5733797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 2302397 |
End bp | 2303860 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641279052 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001544679 |
Protein GI | 159898432 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0218614 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATAA CCAGTCGCGA ATGGGCTATG ATTGAAGACT TTTCGCGCCG GATCACAACC GAAGCGCCAC AATCGTTGGT TGCCTTGGCT CAATCACTGA GTGCGGCATT TCAAGTTGAC GTAACGATTT GGAGCCGCAC TGCTTCTGGT GAATATCATT GTGTTACGCC AAGCGCAGGC CAGCCCGAAG GCCTGATGAT GAGCGCTGAG CAGGCATTAA ACGTCGAAAA AGCTACCTTG ATTTTTGTTT ATGAAGCGTT TTACGCCGCC AAATTTAATC CTGCGCACAA TTTCAGCCCA GCTCAAGTAA TGATTATTCA GGCCTTGCTG GAAGGCTGGA TCGGGCGTTT GCGCACCAGC TATGTCGAGC CGCATGAGCA CGAAAACCTT GGTGATCTGC ATCAATCGTT GTTGCAAAGC ATTATCGATG TGTTGCCAGA AGGTGTCGTT GTCGGTTTAG CGCCTGATGG TCAGTTGATT TTGGCCAATC GTCAGGCCGA GCAATTGTGG CAACACCCAC TGCATTCGGT GCCAGTTGAG GGTTATAGCC ATTTTGGCCT GTATAAACCT GATGGCACGC GCTTGCCGGC TGGCGATTCG GGGATTGCCC GCGTGCTGCG CACTGGGGAG CCATTTCTCA AACATGATTT AATTTTGCGT CGCCCCGATG GCAGTGAAAT TCCAATTTTG GCTAATACCT CGCCGATTCA CGATAATCGC GGTAATTTGA TCGGCGCGGT CGCCGTCTTT CAAGATATCA CTGGCTGGAA ATTGCAAGAA AGTGATCGCG ATAATGCCAT TGCTACTATC GTGCATGATT TAAAAAATCC CCTGACGACG ATTCGTGGCA GTGCCGATTT GCTGTTGCGG CGGGCTAAAA CTGAAAATCG CAGCGAACGC GAGTTAAATC GCTTGCAATC AATTATCGCT CAATCCGATC GTATGCGTGA TTATCTGTCG TTATTGGTTG ATGTTGCGCG AATCAACGCT GGCGAAACCT TAATCAGCCC ATGCTTATTG GATTTTGGTG AGTTGGTCGG CCAATTAATT GCCACGATCA ATGGCGGTTT AGCTAATCCC CGCATCAACG TGGAGCTTCT AGCTAGGCCG TTGGTGCGGG TTGACCCAAT TTGGATGGAG CGAGTGATTT GGAATTTGCT CGATAATGCC CTGAAATATA GCGCCGATGA TACCAATATC GATGTACGCT TAGAGCTTGA GCACGACCAA GTGCTGCTGA GCATTCGCGA TGCGGGCCTT GGTATCGATC CCCAAGATCT TGAGCGAATT TTCGAGCGCT TTACGCGTGG GCGGCATACG CAACGGGTTG GTGGCACTGG TCTTGGTTTG TATACTGTTC GGGCTGTTGT GCGAGCGCAT GGCGGCAGTA TTGTTGTTGA ATCGGAAGGC CTAGGCCGTG GTAGTTGTCT TACCGTAAGC CTTCCCGTTG AATCAAACGA ATAA
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Protein sequence | MNITSREWAM IEDFSRRITT EAPQSLVALA QSLSAAFQVD VTIWSRTASG EYHCVTPSAG QPEGLMMSAE QALNVEKATL IFVYEAFYAA KFNPAHNFSP AQVMIIQALL EGWIGRLRTS YVEPHEHENL GDLHQSLLQS IIDVLPEGVV VGLAPDGQLI LANRQAEQLW QHPLHSVPVE GYSHFGLYKP DGTRLPAGDS GIARVLRTGE PFLKHDLILR RPDGSEIPIL ANTSPIHDNR GNLIGAVAVF QDITGWKLQE SDRDNAIATI VHDLKNPLTT IRGSADLLLR RAKTENRSER ELNRLQSIIA QSDRMRDYLS LLVDVARINA GETLISPCLL DFGELVGQLI ATINGGLANP RINVELLARP LVRVDPIWME RVIWNLLDNA LKYSADDTNI DVRLELEHDQ VLLSIRDAGL GIDPQDLERI FERFTRGRHT QRVGGTGLGL YTVRAVVRAH GGSIVVESEG LGRGSCLTVS LPVESNE
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