Gene Haur_1908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1908 
Symbol 
ID5733797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp2302397 
End bp2303860 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content50% 
IMG OID641279052 
ProductPAS/PAC sensor signal transduction histidine kinase 
Protein accessionYP_001544679 
Protein GI159898432 
COG category[T] Signal transduction mechanisms 
COG ID[COG2205] Osmosensitive K+ channel histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0218614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATAA CCAGTCGCGA ATGGGCTATG ATTGAAGACT TTTCGCGCCG GATCACAACC 
GAAGCGCCAC AATCGTTGGT TGCCTTGGCT CAATCACTGA GTGCGGCATT TCAAGTTGAC
GTAACGATTT GGAGCCGCAC TGCTTCTGGT GAATATCATT GTGTTACGCC AAGCGCAGGC
CAGCCCGAAG GCCTGATGAT GAGCGCTGAG CAGGCATTAA ACGTCGAAAA AGCTACCTTG
ATTTTTGTTT ATGAAGCGTT TTACGCCGCC AAATTTAATC CTGCGCACAA TTTCAGCCCA
GCTCAAGTAA TGATTATTCA GGCCTTGCTG GAAGGCTGGA TCGGGCGTTT GCGCACCAGC
TATGTCGAGC CGCATGAGCA CGAAAACCTT GGTGATCTGC ATCAATCGTT GTTGCAAAGC
ATTATCGATG TGTTGCCAGA AGGTGTCGTT GTCGGTTTAG CGCCTGATGG TCAGTTGATT
TTGGCCAATC GTCAGGCCGA GCAATTGTGG CAACACCCAC TGCATTCGGT GCCAGTTGAG
GGTTATAGCC ATTTTGGCCT GTATAAACCT GATGGCACGC GCTTGCCGGC TGGCGATTCG
GGGATTGCCC GCGTGCTGCG CACTGGGGAG CCATTTCTCA AACATGATTT AATTTTGCGT
CGCCCCGATG GCAGTGAAAT TCCAATTTTG GCTAATACCT CGCCGATTCA CGATAATCGC
GGTAATTTGA TCGGCGCGGT CGCCGTCTTT CAAGATATCA CTGGCTGGAA ATTGCAAGAA
AGTGATCGCG ATAATGCCAT TGCTACTATC GTGCATGATT TAAAAAATCC CCTGACGACG
ATTCGTGGCA GTGCCGATTT GCTGTTGCGG CGGGCTAAAA CTGAAAATCG CAGCGAACGC
GAGTTAAATC GCTTGCAATC AATTATCGCT CAATCCGATC GTATGCGTGA TTATCTGTCG
TTATTGGTTG ATGTTGCGCG AATCAACGCT GGCGAAACCT TAATCAGCCC ATGCTTATTG
GATTTTGGTG AGTTGGTCGG CCAATTAATT GCCACGATCA ATGGCGGTTT AGCTAATCCC
CGCATCAACG TGGAGCTTCT AGCTAGGCCG TTGGTGCGGG TTGACCCAAT TTGGATGGAG
CGAGTGATTT GGAATTTGCT CGATAATGCC CTGAAATATA GCGCCGATGA TACCAATATC
GATGTACGCT TAGAGCTTGA GCACGACCAA GTGCTGCTGA GCATTCGCGA TGCGGGCCTT
GGTATCGATC CCCAAGATCT TGAGCGAATT TTCGAGCGCT TTACGCGTGG GCGGCATACG
CAACGGGTTG GTGGCACTGG TCTTGGTTTG TATACTGTTC GGGCTGTTGT GCGAGCGCAT
GGCGGCAGTA TTGTTGTTGA ATCGGAAGGC CTAGGCCGTG GTAGTTGTCT TACCGTAAGC
CTTCCCGTTG AATCAAACGA ATAA
 
Protein sequence
MNITSREWAM IEDFSRRITT EAPQSLVALA QSLSAAFQVD VTIWSRTASG EYHCVTPSAG 
QPEGLMMSAE QALNVEKATL IFVYEAFYAA KFNPAHNFSP AQVMIIQALL EGWIGRLRTS
YVEPHEHENL GDLHQSLLQS IIDVLPEGVV VGLAPDGQLI LANRQAEQLW QHPLHSVPVE
GYSHFGLYKP DGTRLPAGDS GIARVLRTGE PFLKHDLILR RPDGSEIPIL ANTSPIHDNR
GNLIGAVAVF QDITGWKLQE SDRDNAIATI VHDLKNPLTT IRGSADLLLR RAKTENRSER
ELNRLQSIIA QSDRMRDYLS LLVDVARINA GETLISPCLL DFGELVGQLI ATINGGLANP
RINVELLARP LVRVDPIWME RVIWNLLDNA LKYSADDTNI DVRLELEHDQ VLLSIRDAGL
GIDPQDLERI FERFTRGRHT QRVGGTGLGL YTVRAVVRAH GGSIVVESEG LGRGSCLTVS
LPVESNE