Gene Haur_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1900 
Symbol 
ID5733789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp2292838 
End bp2293881 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content53% 
IMG OID641279044 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001544671 
Protein GI159898424 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGCGC CATTATTGGA AGTCAAGGAT CTCAAAGTCG AGTTCAAGCG GCCTGGTGGC 
GTGGTGCATG CAGTCAACGG GGTTAATTTT ACGCTTGAAG CTGGCCAAAG CCTCGGAATT 
GTCGGTGAAT CTGGCTCGGG CAAGTCGGTG ACGATGCTTT CGTTGCTTGG TTTGATTGGT 
CGGACTGGCC GCGTGGTTGG TGGTTCGGCG ATGTTCAACG GGGTTGATTT GGTCAAAATG 
GCTCCGCGTG AGCTGCAAGA TGTGCGCGGT CGCGATATTG CGGTAATCTT TCAAGACCCA 
ATGACCAGCC TCAACCCAAT TATGAAAATT GGGGCGCAGA TCACCGAAAG TATGCGCATG 
CGCAAAATTT ACTCGGCAGC CGAAGCCAAA GAACGGGCAA TTGAGTTGCT CGATCGGGTT 
GGGATTCCCC AGCCTGCCAA GCGGCTCAAC GATTATCCCT ATCAATTTTC TGGTGGCATG 
CGCCAACGGG TGATGATTGC GCTGGCCTTA GCACTCAAGC CCAAATTGCT GATTGCCGAT 
GAGCCAACCA CCGCACTTGA CGTAACGGTG CAGGCTCAGG TGCTTGATTT GCTCGAATCG 
TTGCAGGACG AAACGGGTAT GGCCATGATT ATTATTACCC ACGATTTGGG CGTGGCCACC 
AACTACTGCG ATAATTTGGC GGTGATGTAT GCTGGCGAAA TTGTCGAAAT GACGACTGTT 
GATCGCTTGG TTGAGCACAC ATCGCATCCC TATGCTTTGG GTTTGCTCAA CAGCACCATG 
GAGATTGGCC ACGGCAAAAC CGCCATCCAG CCAATTCCTG GTAACCCGCC AAGTGCCTTA 
AAAGTGCATA AAGCTTGCCC ATTTGCGCCG CGCTGCCGCT TCAAAAGCAG CGTTTGCCAA 
GAACGCAAGC CCGAATTAAC TACGGTCGAA CCCAATCACC TGGTGGCTTG TTTCCACGCC 
GATGCTGTGG TCAAGGCTGC TCAACAAGGT GATGATGCAG CAGCGGAGGT AATGCTCAAT 
GTCGCCCAAC CAATCCACGC CTAA
 
Protein sequence
MGAPLLEVKD LKVEFKRPGG VVHAVNGVNF TLEAGQSLGI VGESGSGKSV TMLSLLGLIG 
RTGRVVGGSA MFNGVDLVKM APRELQDVRG RDIAVIFQDP MTSLNPIMKI GAQITESMRM 
RKIYSAAEAK ERAIELLDRV GIPQPAKRLN DYPYQFSGGM RQRVMIALAL ALKPKLLIAD 
EPTTALDVTV QAQVLDLLES LQDETGMAMI IITHDLGVAT NYCDNLAVMY AGEIVEMTTV 
DRLVEHTSHP YALGLLNSTM EIGHGKTAIQ PIPGNPPSAL KVHKACPFAP RCRFKSSVCQ 
ERKPELTTVE PNHLVACFHA DAVVKAAQQG DDAAAEVMLN VAQPIHA