| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_1898 |
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| Symbol | |
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| ID | 5733787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 2290916 |
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| End bp | 2291902 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641279042 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001544669 |
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| Protein GI | 159898422 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCGTCA ATTTTATCTT CTTCTTAATC AAACGCTTGG CGATGATGGC AGTTTCGCTG
GTGGTGATTA TTGCAATCTC CTATACGCTG CTCGCCAAAG CCCCAGGCAA TTTTATGGAT
GTCCAGCGAG CGGTGGCCGC AATGACCACG CTGGCCAATA GCAACAGCGA GACCTTCAAA
ATTCAAAAGG CGCTCTTTGA TGAACGCTAT GGCCTCGATA AACCACTCTA TATGCAAATT
TGGACTTACA CCAAAAATGC TGTTACCTTC GATTTTGGCC CCTCGTTTCA AAGCCCAAGT
ATTTTGATTC AAGATATGGT GCGCGAACGC TTGCCGCGCA CGTTGTTGAT CGTCTTCCTC
GGGATTGGCC TCGCATTAAT TGTGGGGATT CCGCTCGGGG TAATTGCTGG TTTTCGCCGC
AATACTTGGA TTGACTATAT CGTGACCGGC TTTTCGATGA TCGGCCAAGT CGTGCCCGTG
TATGTTTTGG CAATTGTGCT GATTCTGATT TTTGCGGGGC AAGTTTGGAA TGTGCTACCA
AATGGTGGTT GGGCCACACC CGTGCCAACC TTCAAGCAAT TGATTTTGCC AGTGCTAACC
TTGGCACTTG GGCCAATTGC TGGGATTGCC CGCTTTACCC GCAACCAAGT TGCTGAAACC
ATGAGTCAAG AATTTATTCG TACTGCTCGC TCAAAAGGTA TCTCCGAGCG CTTGGTGATT
ATGCGCCATG CCCTTCGTAA CTCCTTGATT CCTGTGGTAA CAACCACTGC GCCGCAAATT
GCCTATGCGT TGGTTGGCTC GGTGTGGATT GAAAATATTT TTCGGATTCC AGGGATTGGC
CAATTGTTTG CCACCGCGCT GGGTGCACGC GATTACCCCT TGGTAATCAC CAGCACGGTT
ATTTTGGCCC TTGGGGTTAT GTTGGCCAAT TTATTAGCCG ACATCCTGTA TAGCATCCTT
GATCCGCGGA TTAAGCTCGA AGCCTAA
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| Protein sequence | MRVNFIFFLI KRLAMMAVSL VVIIAISYTL LAKAPGNFMD VQRAVAAMTT LANSNSETFK
IQKALFDERY GLDKPLYMQI WTYTKNAVTF DFGPSFQSPS ILIQDMVRER LPRTLLIVFL
GIGLALIVGI PLGVIAGFRR NTWIDYIVTG FSMIGQVVPV YVLAIVLILI FAGQVWNVLP
NGGWATPVPT FKQLILPVLT LALGPIAGIA RFTRNQVAET MSQEFIRTAR SKGISERLVI
MRHALRNSLI PVVTTTAPQI AYALVGSVWI ENIFRIPGIG QLFATALGAR DYPLVITSTV
ILALGVMLAN LLADILYSIL DPRIKLEA
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