Gene Haur_1888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_1888 
Symbol 
ID5733777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp2276722 
End bp2277822 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content50% 
IMG OID641279032 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_001544659 
Protein GI159898412 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAGCC CAACATCACT AGACACCACG CCGCAACTCG ACGATTTCGA TTACGTTGAA 
TTCTATGTTG GAAATGCTCG TCAGACTGCC CACTTTTTAC GCACCGCCTT TGGCTTCAAA 
CCAATTGCCT ACGCTGGACT CGAAACAGGC GTACGCGATC GCGCCTCGAT TTTGCTGCAA 
CAAGGTGCGA TTCGCCTGAT CATCACCGAA GCACTCGACC CTGAAAGCCC AATCGCCGAC 
CACGTAAAAT TGCATGGCGA TAGTATTAAG GATATTGCCT TTACGGTTGC CAATGTGCAT 
AGCGCCTTCG AGGCCGCCGT TAAACGTGGT GCCCGCCCAA TCTTAGAACC AGTGACAATC 
GAAAGCCCCC AAGGAAGCAT CATCAAGGCC ACCATTGGCA CCTATGGTGA TACAACCCAC 
TCATTGATCC AGCGAGTCGA TCTTGCTGAT AATGCTTTCC CCCAATTTCA GCCAATCGAA 
AATCCGGCTC ACGTAATTGA TGGCGGCTTC TCAGTCGTCG ATCACGTTGC GATTAGCCTA 
GAGCCAGGTC GCTTGGCCGA ATGGGTCGAT TTCTACATCA ATGTGCTTGG TTTCCATCAA 
TCGCACGAAG AAAATATTGT TACCGAATAT AGTGGCATGA ACTCGCGGGT CGTCCAGAAC 
CACGCTGGCA CGATTAAATT CCCTATGCAA GAGCCGATTC AAGGCAAACG GCGTTCGCAA 
GTTGAAGAAT TCTTGACCTT TCATCATGGA GCCGGAGCCC AGCACTTGGC CATCCTCACT 
GATGATATTA TTCACTCGAT CCAGACGCTG CGGGCCAACG GAATCGAGTT TGTGCGCACG 
CCCGCAACCT ACTATGAAAA TCTCCAAGAG CGGGTTGGCT TAATTGATGA AGATATTGCG 
ATGCTGCGCG ATTTGCATAT TTTGGTAGAT CGCGATAGCT CGGGCTATTT GCTGCAAATT 
TTCACCAAGC CGCTGCAAAG CCGACCAACG ATGTTCTTTG AAATTATTCA GCGCAAAAAT 
GCCATTGGCT TCGGCAGTGG CAACATCAAA GCACTCTTTG CCGCCGTCGA ACGCGAGCAA 
GCTTTGCGGG GAAATCTCTA A
 
Protein sequence
MTSPTSLDTT PQLDDFDYVE FYVGNARQTA HFLRTAFGFK PIAYAGLETG VRDRASILLQ 
QGAIRLIITE ALDPESPIAD HVKLHGDSIK DIAFTVANVH SAFEAAVKRG ARPILEPVTI 
ESPQGSIIKA TIGTYGDTTH SLIQRVDLAD NAFPQFQPIE NPAHVIDGGF SVVDHVAISL 
EPGRLAEWVD FYINVLGFHQ SHEENIVTEY SGMNSRVVQN HAGTIKFPMQ EPIQGKRRSQ 
VEEFLTFHHG AGAQHLAILT DDIIHSIQTL RANGIEFVRT PATYYENLQE RVGLIDEDIA 
MLRDLHILVD RDSSGYLLQI FTKPLQSRPT MFFEIIQRKN AIGFGSGNIK ALFAAVEREQ 
ALRGNL